KEGG   Durio zibethinus (durian): 111282664
Entry
111282664         CDS       T05242                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein isoform X1
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111282664
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dzi03041]
    111282664
Spliceosome [BR:dzi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    111282664
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR75_1st PRP4 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_RFWD3 NBCH_WD40 Beta-prop_SCAP eIF2A WD40_like
Other DBs
NCBI-GeneID: 111282664
NCBI-ProteinID: XP_022726592
UniProt: A0A6P5XEA0
LinkDB
Position
Unknown
AA seq 582 aa
MEIDEDNSPSTSAAEPSVSVSDGETTVPAANNTPIQPVQPTVPPFVPPAVVPPIAPIPAI
PPHPIVNPLAPLPVRLPVLKPPVPQNGGVKTSDSDSDHEDAGRATTGEYEISEESRLVRE
RQEKAMQELLMKRRAAALAVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMILAKLD
SEGQLEKLMKAHEEEEAAVSAKVEDIEEDIEYPFYTEGPKELLDARIDIAKYSVVKAAAR
VQRAQRKRDDPDEDMDAEIDWALKQAGNLVLDCSEIGDDRPLSGCSFSRDGKLLATCSLS
GVAKLWSMPKVSKVSALKGHTERATDVTFSPVHDHLATASADRTAKLWNTDGSLLKTFEG
HLDRLARIAFHPSGKYFGTTSFDKTWRLWDIESGMELLLQEGHSRSVYGIAFHQDGSLAA
SCGLDALARVWDLRTGRSILALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKKS
LYIIPAHSNLISQVKFEPQEGYYLVTASYDMTAKVWSGKDFKPVKSLPGHEAKVTASDIS
EGNFLNFKYVKLASLLCFVSSLLEIFHLSSVSFCCPSLHQNF
NT seq 1749 nt   +upstreamnt  +downstreamnt
atggaaattgatgaggacaacagtccatcaacatctgccgcagaaccttcagtttcagtt
tcggatggcgaaacgacagttcctgcagctaataacactccaattcagcctgttcagcct
actgtgccgccatttgtcccacctgcagttgtaccacctattgctccgattcctgcaatt
cctccacacccaattgtcaacccattggcacctctcccagttcgccttcctgtccttaaa
ccgcctgtgcctcaaaatggtggggtgaaaactagtgattcagactccgatcatgaggat
gcagggcgagctactactggtgaatatgagatctcggaagagagcagactggttagagag
cggcaagaaaaggcaatgcaagaacttctgatgaaacgacgtgctgctgcactagcggtg
ccaacaaatgacatggctgtccggactcgacttcgccggcttggtgaacccataactctt
tttggagaaagagagatggaaaggagggataggctgcgaatgattttggcaaagctcgat
tctgaggggcaattggagaaattgatgaaagctcacgaggaggaagaggctgcagtttct
gctaaggtggaggacattgaggaagacatcgaatatcccttttatactgagggtccaaaa
gagcttttggatgctagaattgatattgcaaagtactctgttgtaaaggcagctgctcgt
gttcaacgtgcacagagaaaaagggatgatcctgatgaagatatggatgctgaaattgac
tgggccctaaagcaggcggggaatttggttcttgattgcagtgaaattggagatgataga
ccgctttcaggttgttctttctcacgggatggaaaacttcttgccacctgctctttgagt
ggagttgctaagttgtggtcaatgcctaaggtaagtaaggtttctgccttaaagggccac
acagaacgtgcaactgatgttacattttctcctgtgcatgatcatttagcaactgcatct
gctgaccgaacagcaaagttgtggaacactgatggatctctcctgaaaacatttgagggc
catttggaccgccttgcacgtattgccttccatccttcagggaagtactttggtacaaca
agctttgataaaacatggagactgtgggacatagagagtggcatggagttgcttctccaa
gaaggtcatagtaggagtgtctatggaattgccttccaccaagatggatctttagcagca
tcctgtggacttgatgcacttgctcgtgtttgggatcttcgcactgggagaagtattctt
gccttggaaggccatgtcaagccggttcttggtgttaatttttcacccaatggctatcat
ttagccacggggggtgaagataatacttgtcgcatatgggatttgaggaagaaaaagtcc
ctatatatcataccagctcactcaaatcttatatcacaagtgaagtttgagcctcaagag
ggatactacttggtcactgcttcttatgacatgactgcaaaggtttggtctggcaaagat
tttaagcctgtcaaaagcttaccgggtcatgaagctaaagtcactgcttcagatattagt
gaaggtaattttctgaactttaaatatgtaaagcttgcatctctcctttgctttgtttcc
tctcttcttgaaatatttcatttgtctagtgttagcttttgttgtccttcccttcaccag
aacttctaa

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