Durio zibethinus (durian): 111284602
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Entry
111284602 CDS
T05242
Name
(RefSeq) dicer-like protein 4 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dzi
Durio zibethinus (durian)
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dzi03036
]
111284602
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111284602
microRNA pathway
RISC loading complex
111284602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
Helicase_C
DEAD
ResIII
DND1_DSRM
dsrm
Cas3-like_C_2
PAZ
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
111284602
NCBI-ProteinID:
XP_022729083
UniProt:
A0A6P5XLK0
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MPDGKLSPDRAEPSVAAKANTSAIPSPIVEISEEDGAKVEKKEKDPRKIARKYQLELCKK
AMEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPQKRICIFLAPTVALVQQQGRVIEDSL
DFKVGTYCGNCRHLKNHHDWEREIEQYEVLVMTPQILLRSLYHCFIRMDLIALLIFDECH
HAQIKSNHPYAEIMKVFYDKATASMLPRIFGMTASPVVGKDASSRVNLPKSINSLENLLD
AKVYSVGDKEELESFIASPVVRVYDYGPVNFGPSSSYVIYCSKLEEIKRQCISALGRKNG
DFQSVRNTKKLLNRMHDNIIFCLENLGLWGALQACQLLLTGNNSERNELVEDEGILSDDS
VCDRYLAQAADIFASDCRRDGTAHDLSDVEILKEPFFSKKLLRLTGILSTFRLQPNMKCV
PNMKCIIFVNRIVTARSLSYILQKLKFLSSWKCHFLVGVHSGLKSMSRKTMKNILEKFRT
GELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPMSEYAFLVNSGNER
ELNLIKNFKKDEDRMNMEITFRTSTEVFIDLEERMYKVDTSGASISSGYSISLLHHYCSK
LPHDEYFDPKPSFFYFDDTGGTICNIILPSNAPINEIASTPQSSVDAAKKDACLKAIEEL
HKLGALSDHLLPLQNSVLEEETVLVSSYSGSSEDDDSRGELHEMLVPAALKEPWTNLESY
VLLNSYYIKFIPDPEDRSYKKFGLFVKSPLPKEAERMELDLHLARRRSVMTKLIPSGVAE
FKREEVRTLCSVEFVLMNLLTKIHCLYLHKQIMQAQHFQEMFLKVILDRSKLLSEFVPLG
NNEFLASSSSTFYLLLPVILHNSENKVTVDWRIVQRCLSSPLFKTPAEAVKNENFRSDAC
LQLANGCKSIRDVENSLVYAPHKKAFYFIANIVGEKNGYSLYRDSGTLSHVEHLKMSDIH
LKHPEQPLLHAKPLFKLHNLLHNRKPEDSESQELDEYFIDLPPELCQLKIIGFSKDIGSS
LSLLPSIMHRLENLLVAIELRHVFSVSFPKGAEVTANRVLEALTTEKCQERFSLERLETL
GDAFLKFAVGRHLFLLHDALDEGQLTRRRSNAVNNSNLFKLATRSNLQVYIRDQPFDPCQ
FFALGHPCPLICTKETEETIHSQYSYQVDHANSEVRCSRNHHWLHRKTIADVVEALVGAF
IVDSGFQAATAFLRWIGIHMDFQGSQVNNVCAASKRFMPLCSKVDTGALENLLGYQFLHK
GLLLQAFVHPSHNTHGGGCYQRLEFLGDAVLDYLITSYLFSVYPKLKPGQLTDLRSVSVN
NKSFANVAVDRSLHKFLIHESCPLNEAIEKYVDFITSSPERGLFEGPKCPKALGDLVESC
FGAILLDTGFNLNHVWKIMLSLLDPIKSLSSVQLNPIRELQELCQFRKWDLKFPTSKSGR
NFSVDAKVNAGDVLVAVSAINPNRKDAIRTASHQIYVKLKDLGYAPKSKSLEEVLKGSCK
MEAKLIGFDEKPIDVADPYTNGFENMKLQQSIVNDFNPETYSINKATTICPPCISPVTRP
LHSFEVKAGWTSSNIEIKGPLPNISIVDPNCGIDLLSRGESHKRTARSQLYEICTINCWK
PPLFECCKEEGPSHLRSFIYRVILEMEEAPDMILECFGSPRTTKKAAAEHAAEGALWYLK
HEGYLQ
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacggcaagttgtcccccgacagggccgagccgtccgttgccgctaaagctaat
acctctgctataccctcgccgatcgttgaaatcagcgaagaagatggagcaaaggtggaa
aagaaagagaaagacccacgaaagatagctagaaagtatcaattggagttgtgcaagaaa
gccatggaagagaacataatagtatatttggggactggctgtgggaagacccatattgca
gtgctccttatttatgagcttggtcatctgatacggaaaccccagaaaagaatatgcatt
tttcttgcacccacagtagctcttgttcagcagcaaggtcgggttatagaagattctctt
gatttcaaggttgggacttattgtggaaactgcaggcacttgaagaaccatcatgactgg
gaaagagagattgaacaatatgaggttcttgttatgactcctcaaatactacttcgtagc
ttataccactgcttcatcaggatggatttaattgctcttctgatatttgacgagtgtcat
catgctcaaattaaaagcaatcacccttatgcagaaatcatgaaagttttttatgacaaa
gctactgcatcaatgcttcctcgtatatttggcatgacggcatctcccgttgttggtaaa
gatgcttctagtcgagtaaatttgccaaaaagcatcaacagtcttgaaaacttgcttgat
gctaaggtctattcagttggagataaggaggaactggaaagcttcatagcatctcctgtt
gttagagtatatgattatggtcctgtcaattttggtccttctagttcctacgtgatttat
tgtagtaaacttgaggagattaagcgccagtgcatatcagcgcttggcaggaagaatggt
gattttcaatctgtcaggaacactaaaaagctgctcaacagaatgcatgataatataatc
ttttgcttggaaaatcttggactttggggagcattacaggcttgccaacttcttttgact
ggtaataactctgagaggaatgaattggtagaagatgaaggaattttaagcgacgactct
gtgtgtgatcgatatcttgctcaggctgctgatatttttgcctccgattgtaggagagat
gggactgcacatgatttatctgacgtagagattttgaaggaaccatttttctcgaaaaag
cttttacgccttactggaattctttccaccttcaggttacagccaaatatgaaatgtgtg
ccaaatatgaaatgtataatttttgtgaataggattgttactgcaagatccttgtcatac
atactgcaaaagcttaagttcctatcttcttggaagtgccattttcttgtgggagtccat
tctggacttaaaagtatgtcacggaagacaatgaaaaacattcttgagaagttccgaact
ggagagttgaatcttttggttgcaactaaagtgggtgaagaaggacttgatattcagaca
tgctgccttgtgatacgttttgaccttccagaaactgttgcaagttttatccaatcgaga
ggtcgtgcaagaatgcctatgtctgagtatgcatttctggtgaacagtgggaatgagagg
gaactaaatttgattaaaaatttcaagaaagatgaagatcgtatgaatatggaaattact
ttcagaacatctactgaggtttttattgatcttgaggaaagaatgtataaagttgataca
tccggtgcttccatcagttcaggatatagcatctctctacttcaccattactgctcaaaa
ctaccccatgatgagtactttgatcccaagccaagcttcttttattttgatgatacagga
ggaacaatctgcaatataatcttaccttccaatgctccaataaatgaaattgccagtaca
cctcaatcttcagtggatgctgctaaaaaagatgcttgtctaaaagcaattgaagaattg
cataaattgggagcattgagtgaccatctcttgcctttgcaaaacagtgttcttgaggag
gaaacagtgctggtgtcttcttattctgggagttctgaagatgatgattcacgaggtgaa
ctacatgagatgcttgttcctgctgcgcttaaagaaccatggactaacttggaaagctat
gtcctccttaattcttattatataaaatttattccagatcctgaggataggagctataaa
aagtttggtctctttgtcaaatctcctctccctaaggaggccgagagaatggagctggat
cttcacctagctcgccgtagatcagtgatgacaaagcttatcccatcaggagttgcagaa
tttaagagggaagaggtgagaacattgtgttctgtagagtttgttctaatgaacttactt
accaaaattcactgtctatacctacataagcagatcatgcaggcgcagcattttcaagaa
atgttcttaaaggtcatccttgacagatcaaaacttctttctgaatttgttcctttagga
aacaatgaatttcttgcatcaagctcctcaacattctatttattgctccctgttattttg
cacaatagcgagaataaagtgacagtggactggaggattgtgcaaagatgtttgtcatct
ccactttttaagactcctgcagaagctgtaaagaatgaaaacttccgttcagatgcttgc
ttacaacttgccaatggttgtaagagtataagagacgttgagaatagtttggtgtatgct
ccacacaagaaggcattttactttattgctaacattgttggtgaaaaaaacggttacagc
ctgtatagagactcaggcactttaagccatgtggagcacttaaaaatgtctgacattcat
cttaagcatcctgaacaacctcttctgcatgcaaagccactttttaaattgcacaatttg
ctacacaaccgaaaaccggaggattcagaatcacaagaattggatgagtacttcattgat
ttgcctcctgagctttgtcagttgaaaataataggcttctccaaagatattggaagttca
ctttctttgttaccatcaattatgcaccgcttggagaacttgcttgtggcgattgaattg
aggcatgttttttctgtgtcattccccaagggagctgaagttacagccaatagggtccta
gaagcactcactacagagaagtgccaagagcgtttttctcttgaaaggcttgaaacactc
ggtgatgccttcctcaagtttgctgtaggccgccatctttttcttttacatgatgcactt
gatgaagggcaactgactaggagaaggtctaatgctgtaaataattctaatttgttcaag
ctagcaacaaggagtaatttgcaggtttatatacgcgatcaaccttttgatccttgccag
ttctttgctttgggccatccctgcccactaatttgtaccaaagaaactgaagaaactatt
cattcgcaatatagttatcaagtagatcatgcaaatagtgaagtcagatgcagtagaaat
caccattggctacataggaaaacaattgctgatgtggttgaggctcttgtaggagcattt
atagttgatagtggcttccaagctgcaactgcatttcttagatggattggcatacacatg
gacttccaaggttctcaagttaataatgtttgtgctgcaagcaagaggttcatgccactt
tgttctaaagtggataccggagctcttgaaaatttgttgggttatcaatttcttcacaag
ggtctacttcttcaggcatttgtgcatccttctcataatacgcatgggggaggctgctac
cagagattggagtttctcggagatgctgtcttggattatttaatcacatcatatcttttt
tcggtctatccaaagttgaagcctggtcagttgactgatttgagatcagtgtcagtgaac
aacaagtcctttgccaatgttgcagtagatagatccttacacaaatttcttatccatgaa
tcttgtcccctcaacgaggccatagaaaaatatgttgacttcattacatcatcaccagaa
aggggattgtttgaagggccaaaatgtccaaaggctcttggtgacttggtagagtcttgt
ttcggtgctattctccttgatactgggttcaacttgaaccatgtttggaagataatgcta
tcccttttggatccaatcaagagcctttcaagtgtgcagctcaatcctatcagggaatta
caggaactttgccagtttcgtaagtgggatctgaagtttccaacatctaaaagtggcaga
aacttttcagtggatgcaaaagtaaatgcaggagatgttctggtagctgtttctgcaatc
aaccctaacagaaaagatgctatcagaactgcttcacatcaaatatatgtaaagttaaag
gatctaggttatgcacccaagtcaaagtccttagaggaagttttaaagggaagctgcaag
atggaagccaaactgattggatttgatgaaaaaccaattgatgttgctgatccttatact
aatggatttgaaaacatgaaattgcagcaatctattgtgaatgatttcaaccccgaaacc
tattccattaataaggcaactactatctgtccaccttgcatctcacctgttaccagacct
ctgcattcttttgaagtcaaagcaggatggacgtcatcaaatattgaaatcaaagggccg
ctccccaatatctccatagtggatcctaattgtgggattgacttgctatccagaggtgaa
tcacataaacggactgccagatcacagttatatgaaatttgtactatcaattgttggaaa
ccccctttgttcgaatgttgcaaagaggaaggaccaagccatttgagatcattcatttac
agggtaattcttgaaatggaagaagccccagatatgatcttggagtgctttggcagtcct
agaaccacaaagaaggctgcagcagagcatgcagcggaaggcgcactctggtacttgaaa
catgaaggatacttacagtag
DBGET
integrated database retrieval system