Durio zibethinus (durian): 111285723
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Entry
111285723 CDS
T05242
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03022
Basal transcription factors
dzi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111285723
09124 Replication and repair
03420 Nucleotide excision repair
111285723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111285723
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111285723
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111285723
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111285723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
Plant_vir_prot
Motif
Other DBs
NCBI-GeneID:
111285723
NCBI-ProteinID:
XP_022731032
UniProt:
A0A6P5XSW8
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MISDIRPSTDGRTNKVTFNLTPENILQIFSEKPAVLHAFLSYVPNKMSERDFWTKYFRAE
YLHGTKNSIAAAAEAAEDEELAVFLKQDDILASEARWKVRRVDPTLNMEADEGDDYTHLP
DRGIFRDGSKEMTESQNELYRRTLSQDFNRHAAVVLEGRAVDVELEDTRAVAEALARSKQ
ELSTKGESDGDASWERLDRVSRMTEIEDLQGPNNLPLAPLCIKDPRDYFDSQQANALRTS
GDAFGGMEQIKCSLSTQEVYGSLRESISQIKATGLKDPIVKPEVAHQVFDALTNSISTTK
YHIGKNPHESVLDRLPKKTKEELLHFWFVSCNILLIKNSQCCQHWTSILELLKHFWASYP
ITTTYLYTKVNRLKDAMSNIYPQLEEIKGSVPSDLRHQVSLLVRPMHQAVDAAIQHYEAD
MQKRSTRRETKWIRLGGTIPLLYACLILTYTLYIRSILLWRGSYFCPIDVKTTSHLQMQH
FSEIIRGEEPCAPLIC
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgacatcagaccatcaactgatggtcggacaaacaaagtcacatttaatttg
actccagagaacattcttcaaattttttctgagaagccagctgttctccatgcattctta
agttatgttcctaacaagatgtcagaaagggatttctggaccaaatattttagagcagaa
tacctacatggtacaaaaaatagtattgctgctgcagcagaggctgctgaagatgaggaa
cttgctgtttttctcaagcaggatgacatattggcaagtgaggctcggtggaaggttagg
cgggttgacccaactctgaacatggaggctgatgagggggatgattatacacatcttcca
gatcgtggaatctttcgtgatggtagtaaggaaatgactgaatcacaaaatgagctatac
cgaagaactctatcccaagacttcaaccggcatgctgcagttgttcttgagggaagagct
gtagatgtggagttggaagacacaagggctgtagcagaagcgcttgctaggtcaaaacag
gaattatcaactaagggagaatctgatggggatgcaagctgggagaggttagatagggta
tcaaggatgactgaaatagaagatcttcagggaccaaataatcttccactagcaccactt
tgcattaaggatcctcgagactattttgactctcaacaagcgaatgcacttagaacttct
ggagatgcatttggtggaatggaacaaataaaatgcagtttgagcacccaggaggtgtat
ggttccttgagagagtccatctctcaaatcaaggctacggggttgaaggatcctatagtc
aagcccgaagttgctcatcaagtttttgatgctttgaccaatagtatctcaaccaccaaa
tatcatatcgggaaaaatcctcacgagagtgttctggacagattgccgaagaaaactaaa
gaggaactattgcatttttggtttgtgtcctgcaatattttgcttataaaaaactctcaa
tgttgccagcattggacatcaatccttgaactgcttaaacatttttgggcatcatatcct
atcaccacaacttacctctataccaaggtaaacagactgaaggatgccatgtcaaatatc
tatccacagctagaggagattaagggatctgtcccatcagaccttcgacatcaggtttcc
ctccttgttcgtccaatgcatcaggctgtagatgctgctattcaacattatgaagcagac
atgcagaagagatccacacggagagagaccaaatggattcgtctaggaggaactataccg
ttgttatatgcctgcctcattctaacatacaccctgtacattagatcaattttgctgtgg
aggggatcttatttttgtcccattgatgtcaaaacaacttcgcacttgcaaatgcaacat
ttttctgaaatcattagaggcgaggagccgtgtgcacccctgatctgttaa
DBGET
integrated database retrieval system
