Durio zibethinus (durian): 111286139
Help
Entry
111286139 CDS
T05242
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111286139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111286139
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111286139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
ARM_TT21_N
TPR_10
TPR_MalT
ARM_TT21
TPR_8
SRP_TPR_like
DUF627
Motif
Other DBs
NCBI-GeneID:
111286139
NCBI-ProteinID:
XP_022731690
UniProt:
A0A6P5XU06
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MLSESFTHFAPWCKLWYNYIQSNWSDLVMDSRDSSSSSAPNRDGAAGDHDGVLSIAAALA
KDAALYFESRKFDECLDVLNQLKQNKEDDPKQVLHNIAIAEFFRDGCSDPKKLLEVLNNV
KKRSEELAHASGEQVETGSNVGNKVISGSKGSGTTTLFSASNSASVIYADEFDTSVAALN
VAVIWFHLHEYAKALSVLEPLYQNIEPIDETTALHICLLLLDVVLACHDASKSADVLNYL
EKAFGVGNVSQGDNGNMAAQQSMNLVGKSSSLPSGTFVADASSSDLAASLNSSENPLSGT
LSEDQLDEMFSTLDIGRQNLARTAGLTSANDLPRITVDKSISGVDLKLKLQLYKVRFLLL
TRNVKLAKREVKHAMNIARGRDSSVALLLKAQLEYARGNHRKAIKLLMASSNRTDAVISS
MINNNLGCIYYQLGKYHTSAVFFSKALSNCSSLQKEKPLKLLTFSQDKSLLITYNCGLQY
LACGKPILASRCFHKSSLIFYKRPLLWLRLAECCLMAVEKGLVKGSRASSDRSEIRVHVI
GKGRWRKLLIEDGISRNGLVDSVEKDDWALGGNGQPKLSLPLARQCLYNALHLLNCSEWS
NSKSVLPSSLSSEEDESSDGASSRNSNHNNLPGIDSKASTMLVGLVNSNGDLKEPKGGTN
QEIIQNSIYYYEDICRRENQMIKQALLANLAYVELELENPLKALSAAQSLLELPGCSRIY
IFLGHVYAAEALCLLNKPKEAAEHLSIYLSGGNNVKLPFGQDDCEQWRVEKPVDCEESNG
GASAANNTSPEALQEFMFLKPEEARGTLYANLATLSAIQGELDRAHHFVMQALSLVPNSS
EAIMTAIYVDLMLGKSQEALSKLKHCSHVRFLPSSLQLNKSS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtgagagtttcacacatttcgctccttggtgtaaattatggtacaattatatc
cagtctaattggtctgatctggtcatggattcgcgagattcatcatcgtcgtcggctccg
aatcgagatggtgctgccggcgaccacgacggcgtcctctccatcgctgccgcacttgct
aaagacgccgctctttacttcgagtctaggaagttcgacgagtgcctcgatgtcttgaat
cagctcaaacagaacaaagaagacgatccaaagcaggttcttcataatattgcaattgcg
gagttttttcgggatggttgctcagatccaaagaagttgcttgaagtccttaacaatgtc
aagaagagaagtgaggagctcgcacatgcatctggggaacaggtggaaaccggtagcaat
gttggaaataaggttatttcaggttcaaaaggaagtggtacaactacactgttttctgct
tcaaatagtgccagtgttatttacgcagatgaatttgatacttctgtggctgctctaaac
gtagcagtcatttggttccaccttcatgaatatgcaaaggcattatctgttcttgaacct
ctgtatcaaaacatcgaaccaatagatgagacaacagctcttcatatctgcctcctgttg
ctggatgttgtgctagcttgccatgatgcttcaaaatctgccgatgtattgaattatttg
gaaaaggcatttggcgttggtaatgtgagccaaggggacaatggtaacatggctgcccaa
caatccatgaatctagttggaaaatcttcctcacttccaagcggtacgtttgtcgcagat
gcttctagttcagacttagctgctagtctaaattcctctgagaatcctctatctggaact
ttatctgaggatcagctggatgagatgttttcaacactggatattggtagacagaacttg
gcaaggactgctggtcttacatctgcaaatgatcttcccaggatcacagttgataaatct
atctctggtgttgatctgaagctcaaattgcaactttacaaggttcggtttttgcttctc
actagaaatgtaaagctagcaaagcgcgaagtcaagcatgctatgaacattgctcgaggg
agagattcatccgtggctctcctcttgaaggcccagcttgagtatgctcgtggaaaccat
cgaaaggccatcaagttgttgatggcatcaagtaatcggacagatgcagtaatttcaagc
atgattaacaacaatctaggctgcatttactatcaacttgggaagtatcatacttctgca
gtgttcttttccaaggcactgagtaattgttcatctcttcagaaggagaagcctctaaag
cttttaacattctcacaggataaatctctcctcataacatataactgtgggttgcagtac
ttggcctgtgggaaaccaatactagcctctcgttgtttccacaagtcaagtttaattttc
tacaaaagacccctcttgtggcttcggcttgctgaatgttgtctaatggctgtagagaaa
ggacttgtaaaaggaagtagagcttcatcagacagatcagaaattagagtccatgttatt
ggaaagggtaggtggaggaaacttctaattgaagatgggatttcaagaaacggacttgta
gattctgttgaaaaggatgattgggctttaggtggtaatgggcagcccaagctttcgtta
ccccttgctaggcagtgtctctataatgcactgcacttgttgaactgttctgagtggagt
aattcaaagtctgttttaccatccagtttgtcctcggaggaggacgaatcaagtgatgga
gcatcttccaggaactcaaaccataataacttacctgggattgattccaaggcttcaact
atgttagtaggtctagttaactcaaacggggatttgaaagagccaaaggggggaactaat
caggagattattcagaactcaatctattattatgaagatatatgcagaagagaaaatcag
atgattaagcaagctcttcttgctaacctggcatatgtagagttagaactggaaaatcct
ttgaaggctctttctgcagcacaatctctcttagaactgccaggttgttcaagaatttac
atctttctaggtcatgtctatgcagcggaggctctctgcttgctgaacaagcctaaggaa
gctgcggagcatttgtccatttatttatccggggggaataatgttaaattgccgtttggt
caagacgactgtgagcagtggcgagtggaaaaacctgttgattgtgaagaatcaaatgga
ggagcatcagctgccaataatacttcccctgaggccttgcaggaattcatgtttcttaag
ccagaagaggcacgtggaacgctttatgcaaatcttgccaccttatctgcgatacaaggt
gaacttgatcgtgcccaccattttgtaatgcaagcattgtccctggtaccaaacagtagc
gaagccattatgactgcgatttatgttgatctcatgctaggtaagtcacaagaagctctg
tccaagttaaaacattgtagtcatgtcaggttccttcccagcagtctacagttgaataaa
tcctcctaa
DBGET
integrated database retrieval system
