Durio zibethinus (durian): 111286457
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Entry
111286457 CDS
T05242
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111286457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111286457
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111286457
mRNA cycle factors
Common to processing body (P body) and stress granule
111286457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
111286457
NCBI-ProteinID:
XP_022732164
UniProt:
A0A6P5XVC0
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MMIEQMDKMSAPSSKERAQHLYEKNIELESNRRRSAQARVPSDPNAWQQMRENYEAIILE
DHAFSEQHNIEYSLWQLHYKRIEELRAHYTTAIASVGVNASQGVKVPQRPDRLTKIRLQF
KTFLSEATGFYHDLILKIRAKYGLPFGYFSDDSESQIVMDKDGKKSADIKKGLVSCHRCL
IYLGDLARYKGLYGDGDSKSREYAAASSYYLQAASIWPSSGNPHHQLAILASYSGDELVA
VYQYFRSLAVDNPFSTARDNLIVAFEKNRHNYSQLPGDVKLVKEPAVRLSGKGRGKVVAK
LASKDASKEPGPAKEKVSGFQDTFKSFCIRFVRLNGILFTRTSLETFADVLTLVSRDLCE
LLSSGPEEELNFGTDAAENALLLVRLVSILVFTVYNLKREGEGQTYAEIVQRAALLQNAF
TAIFELMGHIVERCSQLQDVSSSYTLPAVLVFVEWLACCPDVAAAGSDVDEKQSITRSLF
WKRCISFLNKILSIRPMCIDDGEDETCFFNMSRYEEGETENRLALWEDFELRGFLPLVPA
HTILDFSRKRSFVSDGDKERKARVKRILAAGKALANVIRVDQETVCFDSKAKKFRIGVEP
SEDVTFSSSTPLETNGVGHETPSEKTINIGNVQPTPQPIMFGEEDDDDEVIVFQPAVSEK
RTEVIGPNWRPSDTLKLDQSSSTGDLIFYGSTMSAPFDSLRQHNTFDANPPLPVSVGSIL
PQHLQPVQMHASRWSAEEATSLANSLKGLTMLENGHLRKCEMQDNGGVSHPAARSVAIQQ
PISPFAGGMYYSQTKGPETVMPSRIDAMVSSGVTTDALAGKTTSALQVGMRKNPVCRPVR
HLGPPPGFSPVPPKPLSGSVSASDLENPLMDDYRWLDGYQLTSSLKGSGLDGSLNYASHA
DPQYVNNSSNVSTGMVSFPFPGKQVAAVQFQTEKQKGWQDYNTLEHLKIQHQQKLQQQQL
MNGNQQFTSLPEQYQGQSVWTGRYFV
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgatgatagagcagatggataaaatgtctgctccttcatccaaggagcgcgcacagcat
ctttatgagaagaatatagagttagaaagtaatcgtaggagatcagctcaggcacgagta
ccttcagatcccaatgcctggcagcagatgcgtgagaactatgaggcaataattcttgag
gaccatgctttttctgagcagcacaatattgaatattctttgtggcagttacattataag
cggattgaggaactaagggcacattataccactgctatagcttctgtaggagtgaacgcc
tctcagggtgtgaaagttcctcaacgacctgaccggcttacaaaaataagactgcagttt
aagactttcctttcagaggcgacaggattttatcatgatctgattttgaaaatcagagca
aagtatggacttccatttgggtacttttctgatgattcagaaagccagattgttatggac
aaagatgggaagaaatctgctgacataaaaaagggtttggtgtcttgtcaccgttgtttg
atatacctgggagacctagcacggtacaaaggattatatggagatggagactctaaatca
cgcgaatatgcagcagcttcaagttactacttgcaagctgcatcaatttggccatcaagt
gggaacccacatcatcagctagctatattggcttcctattcaggagatgagctggtggct
gtttatcaatatttccggagtttggcagttgataatcccttttcaactgcaagggataac
ttgatcgtggcatttgagaagaatcgtcataattactcacagctacctggggatgttaaa
ttggtcaaggagcctgctgtgcgtttatcgggaaaaggcagagggaaagtggtagcaaaa
cttgcatctaaagatgccagcaaggaaccaggccctgctaaggagaaagtatctggtttc
caggatacttttaagtccttttgcattcgatttgtgcgtctaaatggtattctttttaca
cgcacaagcctggagacttttgctgatgttcttactctggttagccgtgatttatgtgaa
cttctctcttctgggccagaagaggaacttaattttggcacagatgctgctgagaatgca
cttctccttgttaggctggtttccattctcgtgtttacagtttacaatctgaagagggag
ggtgaaggtcaaacatatgctgaaattgtacagcgtgctgccctacttcagaatgcattc
actgccatttttgagttgatgggacatatagtagagagatgttcacagctccaggatgtt
tcttcaagctataccttacctgctgttctagtttttgtagaatggctggcttgctgcccg
gatgttgcagcagctggcagtgatgtggatgagaaacagtctatcactagatcacttttc
tggaaacgctgcatatcatttctgaataagatcttgtcaattaggccaatgtgcatagat
gatggtgaagatgagacctgctttttcaatatgagtaggtatgaagaaggagaaactgaa
aaccgtcttgcattgtgggaggactttgagttgcgagggttcttgcctcttgttccagca
cataccattttggacttctcaaggaaacgttcctttgttagcgatggcgataaggaaagg
aaagcccgtgtcaagagaattttagcagctgggaaagctctagctaatgtcattagggtt
gatcaggaaactgtttgttttgattcgaaagccaagaaatttcgtattggtgttgagcct
tccgaagatgtgacattcagctcttctaccccactggaaacaaatggtgtggggcatgaa
actccctctgagaagacaattaatattggaaatgttcagccaactccacagcctataatg
tttggtgaagaggatgatgatgatgaagtgattgttttccagccagctgtgagtgagaag
agaactgaggtaattggtccaaactggcgcccctctgacactttgaagcttgatcaaagt
agttctacaggtgatctcatattttatggcagtaccatgtctgctccttttgatagtctt
cgccagcataatacatttgatgctaatcctccactgcctgtatctgttggtagcattctc
ccacagcatctacagcctgttcagatgcacgcatctaggtggtcagctgaagaagctact
tctctggctaatagcttgaaaggtttgacaatgttggagaatgggcatttaagaaaatgt
gagatgcaagataatggtggtgtttctcatcctgctgctcgttctgttgctatccaacaa
cccatcagtccttttgcaggtggtatgtattacagtcagacaaaagggccagaaactgtg
atgccatccagaattgatgctatggtgtcatctggagttactactgatgctttggctggt
aaaactacctcagctttgcaagtcgggatgcggaagaatccagtttgccgcccagttagg
catcttggtcccccaccaggttttagccctgttcctccaaagccactgagtggatctgtt
tctgcttcagatttggagaacccgctgatggatgattatagatggttggatggatatcag
ttgacatcatcattgaaaggctctggccttgatggttctctcaattatgcatctcatgca
gatccccagtatgtcaataacagcagcaatgtctcgactggaatggtaagctttcctttc
cctggaaaacaagttgcagcagtgcagtttcaaacggaaaagcagaaaggctggcaggat
tacaatactcttgagcatctgaaaattcaacatcaacagaaattgcagcaacagcaactc
atgaatggaaaccagcagttcacctcactgcctgagcagtatcaaggacagtcagtctgg
acgggtcgttattttgtgtga
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integrated database retrieval system