KEGG   Durio zibethinus (durian): 111287981
Entry
111287981         CDS       T05242                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03018  RNA degradation
dzi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111287981
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111287981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dzi03019]
    111287981
   03041 Spliceosome [BR:dzi03041]
    111287981
Messenger RNA biogenesis [BR:dzi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111287981
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     111287981
Spliceosome [BR:dzi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    111287981
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 111287981
NCBI-ProteinID: XP_022734439
UniProt: A0A6P5Y347
LinkDB
Position
Unknown
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLSGGRQVTGTLKGYDQLLNLVLDEAVEFLRDQDDPMKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcgggcaggaaagaaacagtcttggatttggcaaagtttgtagacaaaggtgttcag
gtcaaactctctggtggtagacaagtcacagggactctaaaaggatatgaccagctacta
aatcttgtcctggatgaagctgtagaatttcttcgagatcaggatgatccgatgaagact
actgatcagaccaggcgtcttggcttgatagtttgtaggggtactgcggtgatgctagta
tcaccaactgatggcacggatgagattgccaatcctttcatccagccagatggagcctga

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