Durio zibethinus (durian): 111287981
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Entry
111287981 CDS
T05242
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111287981
09123 Folding, sorting and degradation
03018 RNA degradation
111287981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111287981
03041 Spliceosome [BR:
dzi03041
]
111287981
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111287981
mRNA degradation factors
5'-3' decay
Lsm complex
111287981
Spliceosome [BR:
dzi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111287981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
111287981
NCBI-ProteinID:
XP_022734439
UniProt:
A0A6P5Y347
LinkDB
All DBs
Position
Unknown
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLSGGRQVTGTLKGYDQLLNLVLDEAVEFLRDQDDPMKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcaggaaagaaacagtcttggatttggcaaagtttgtagacaaaggtgttcag
gtcaaactctctggtggtagacaagtcacagggactctaaaaggatatgaccagctacta
aatcttgtcctggatgaagctgtagaatttcttcgagatcaggatgatccgatgaagact
actgatcagaccaggcgtcttggcttgatagtttgtaggggtactgcggtgatgctagta
tcaccaactgatggcacggatgagattgccaatcctttcatccagccagatggagcctga
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