Durio zibethinus (durian): 111288794
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Entry
111288794 CDS
T05242
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03013
Nucleocytoplasmic transport
dzi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111288794
03015 mRNA surveillance pathway
111288794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111288794
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111288794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111288794
NCBI-ProteinID:
XP_022735505
UniProt:
A0A6P5Y520
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MVKPTRGRRSPSKSGSGSSSRSRSRSRSSLPLLLRFRLQVRLPLSVCLRSTSASPSGSRS
RSLSSSSPSRSASFRSRSPPSKRRRSLIYFSLQIFDTHLINSPADAPRRGRPLCHSLKRH
LQLQGKAIFTTDLPVFHLREIFGNFGEIVNVDLAMDRALNLPRGYGYVEFKKRTDAEKAL
LYMDGAQIDGNVVRAKFTLPPRPKVSPPPKPIASATKSDAPKPDTAGADIERDGIKRPRE
FSPQRKPLSSPRRRSPVGRRGGSPRRPTESPRRRVDSPIRRRAESPYRRAEMPPRRRPAS
PARGRSPLSPPRRLRSPARTSPRRMRGSPIRRRSPPPRRRSPPRHARSPPRRSPFSRRRS
RSPIRRPAHSRSRSISPRRGRGPAARRGRSSSYSKSPSLRKVTRRISRSRSPRR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccgacgagaggccgtcgctcaccctccaaatccggctccggttcctcatcc
cgttctcggtcacggtccaggtcctcgctcccgctcttactccggttcagactccaagtc
cggctcccgctctcggtctgtctccggtccacatctgcttctccatctggctctcggtct
agatccttatcctcttcctctccttctcgcagcgctagctttcgaagtcgcagccctcct
tctaagcgtcgaaggtcacttatttacttctctcttcaaatttttgatactcatttaata
aattctccagctgatgcacctaggcgaggtcgtcccctttgccacagtctaaaaaggcat
ctccaactccaaggtaaagctattttcactacagatttaccagtattccatctaagagaa
atattcggtaattttggtgaaattgtaaatgtggatctggcaatggaccgtgctcttaat
cttccaagaggatatggctatgttgaattcaagaagaggacagatgctgaaaaagctcta
ctgtacatggatggtgcccagattgatggcaatgttgtaagagcgaagtttacacttcct
ccacgaccaaaagtttccccaccgccaaaacctattgcttctgctactaaaagtgatgct
ccaaaacctgacactgctggtgctgatattgagagggatgggataaaacgaccacgggaa
ttttctcctcaacggaaacccctgtcctcaccgcgaaggagatcgcctgtgggtcgaaga
ggtggatctcctagacgaccaacagaatctccacgtcggcgagtagattctcctattcgt
cgtcgtgcagaatccccttaccgtcgtgctgaaatgcctccaaggcgccgacctgcctct
cctgctagaggtcgttctccattgtctcctccaaggaggcttagatctccagcaaggacc
tctcctcgtaggatgcgtggtagtccaatccgaagacgttctcctcctccaaggcgccgt
tcacctcctcgacatgcccgtagtcctccaagaaggtctcccttcagtcgtagacggagc
cgttctccaattcgtagacctgctcattctcgttcaaggtcaatctcacctaggagaggc
agaggaccagcggcaagacgtgggcgatcatcatcctattccaaatcaccaagtctgcgg
aaggtaacaaggaggatttcaaggagtcgcagtcctagaaggtaa
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