Durio zibethinus (durian): 111289758
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Entry
111289758 CDS
T05242
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111289758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dzi03041
]
111289758
Spliceosome [BR:
dzi03041
]
Common components
Common spliceosomal components
SR proteins
111289758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_5
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
111289758
NCBI-ProteinID:
XP_022736790
UniProt:
A0A6P5Y8U4
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MRPIFCGNFEYDARQSDLERLFRKYGRVERVDMKSGFAFIYMEDERDAEDAIRALDRTEF
GRKGRRLRVEWTKHERGIRRPGGSSRRSSANTRPSKTVFVINFDPYQTRTRDLERHFESY
GKIVSVRIRRNFAFVQYDSQDDATRALEATNMSKLMDRVISVEYAVRDDDERRNGYSPDR
IRDRSPERGRDRRRSPSPYRRERGSPDYGRGSSRSPYRKERGSPDYGQGRSSSPYKRERA
SPEYGRGTSHSPYRRERAGSDHAFGSSGSPYRKERASPENGLGPSRSPYGREKHSAKNDR
SCSHSPYRRERPSSDNGRGPSHSPYGRERASLENDRGPSPSSMPEGRVSPYGGEAESPVN
ERYRSQSPAVEE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagacccattttctgtggaaactttgagtatgacgcacgtcagtctgatttggaacgg
ctcttcagaaaatatggaagagtagaacgagtggatatgaagtctggatttgctttcatc
tacatggaagatgagagagatgctgaagatgccattcgtgcacttgatcggacagaattt
ggtcgaaaaggacgcaggctacgtgttgaatggacaaagcatgagcgtggcattagaagg
cctgggggtagttcaagaagatcttcagcaaatacaagaccttcaaagactgtatttgtc
atcaattttgatccatatcaaactcggactagggatttggaaaggcactttgagtcatat
ggaaagatagtgagtgtacggatcagaaggaattttgcatttgtacaatatgattcgcag
gatgatgccaccagagcattggaggctacaaatatgagcaagctgatggatagagttatt
tcggtggaatatgcagttcgagatgatgatgagcgccggaatggatatagccccgataga
attcgtgataggtcacctgagaggggtcgtgacagaaggcgatctccaagtccctaccga
agagagaggggtagccctgattatggtcgtggctctagtcgcagtccttataggaaagag
agggggagccctgattatgggcaaggccgcagttcaagtccctataagagagaaagagca
agtccggagtatggccgaggcaccagccatagtccttaccgaagagagagggctggttct
gaccatgcttttggctccagcggaagtccttacaggaaagagagggctagccctgagaat
ggcctaggccccagccgtagtccttatgggagagagaagcatagtgctaaaaatgatcga
agctgtagtcatagtccatatagaagagaaaggcccagctctgacaatggtcgtggaccc
agccatagcccatatggaagggagagagctagccttgagaatgaccgtggtcccagccca
agttctatgcctgaaggaagggtcagtccatatggcggtgaagctgaaagcccagtcaat
gagagatatcgcagtcaatcgccagcagttgaggaatga
DBGET
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