Durio zibethinus (durian): 111289800
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Entry
111289800 CDS
T05242
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111289800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111289800
03036 Chromosome and associated proteins [BR:
dzi03036
]
111289800
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111289800
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111289800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
111289800
NCBI-ProteinID:
XP_022736858
UniProt:
A0A6P5Y8S0
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MFGTTNPFGQSSSSPFASQSVFGQTNNAASNPFAPKPSFGSPTPFGSQTGGSIFGGTSTG
VFGATQASSPFSSTTAFGASSSSAFGSSMPAFGSSSTSAFGSSSSSFGGPSVFGQKPAFG
FGSTATQSSPFGSTTQQSQPSFGSGIFGSSTPFGSTQSAFGSGTPAFGATSTPAFGATST
PAFGAAALLALSSTGSPAFGATSTPAFGSTGSPAFGSTGTAFGMSNAPVFGTGGAFGASS
TPAFGTSSTPAFGTSSTPAYGTSSTPAFGTSSSVFGGSSTPAFGASSTPSFSFGSSPAFG
QSTPAFGSSPFGTTSFGAQGSPFGTQSSAAAFGSTSFGQSPFGGQRGGSRVAPYTPTTEA
DSGSGTQPAAKLESISAMPVYKDKSHEELRWEDYQLGDKGGPQPAAQPSGGIGFGVSTAP
TNPFGSSPTFGQTSSNPFSSTSINPFSLKPPSFNSTGFTTSTAISNPFQSTSSSLFGPTS
STSSIFGSSSTPTFGTSSSLFSSSVTPSFSTSPSIFGTGAAPATTPAFATGLNFSSSQTS
PLFNSTPAIGQTSNAFGHMTSTFGQNASNFGQTSIFSTPSTGFSGNMFSSSLSLAPSSNP
AAFGPTTPSFASPFQTAQPAQTSGAFSFSNFGHTQSGGGLGIFGQSNIGLSSATQSAAVV
QPVTITNPYGTLPAMPQISFGRAGTAPSVQYGISSMPVVDKPAPVRISPLLTSRYLSQRR
IRLPARKYHSNNDSPKVPFFSDDEETPSTPKADAVFIPRENPRALVIHPRESWPSKASAE
KASPLKDASTRVQENGKISDDGSNAEDKDKNPAENGLVKEPIHPVRGNQKANGVNDNQSA
QKEDSYLTLSGHRAGEAAIVYEHGAEIEALMPKLRRSDYYTEPRIQELAAKERAEPGYCR
RVKDFVVGRHGYGSIKFLGETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAE
VTLLNIKCFDKKTRHQYTEGPKVERYKDMLKRKAEDQGAEFLSYDPIEGEWKFRVNHFSM
YKLEDEEEDYSEMCSVPDCW
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtacaactaacccttttgggcaatcatcaagtagcccatttgcatcccaatct
gtttttggccagaccaacaatgcagctagcaatccgtttgcacctaaaccttcctttggt
agtccaaccccttttggctcccaaacagggggttcaatatttgggggtacttctactgga
gtgtttggtgcaacccaagcttcttctcccttttcctccacaacagcctttggtgcctca
tcatcttcagcttttggaagttccatgcctgcttttggatcttcttctacttctgctttt
ggcagttcatcatcatcttttggtgggccttctgtttttggtcagaagcctgcatttggc
tttgggtctacagccactcagtccagtccttttggaagcacaactcagcaatcacagcct
tcatttggtagtggtatatttggttcctccacaccttttggttcaactcagtctgcgttt
ggttccggtacgcctgccttcggtgccacgagcaccccagcttttggtgccacgagcacc
cctgcgtttggtgccgcagcactcctggctctctcgtcaactggaagccctgcctttggt
gccacgagcacccctgcctttggttcaactggaagtccagcatttgggagcactggaact
gcatttggcatgtctaatgccccagtctttggaactggaggtgcatttggggcatcaagc
acacctgcttttggtacttccagcactcctgcttttggaacttccagcactcctgcttat
ggaacttccagcactcctgcttttggaacttctagttctgtttttgggggttcaagcact
cctgcttttggagcatcttccactccttcattcagctttgggtctagcccagcttttggt
caatcaacgccggcatttggtagtagtccttttggaacaacttcatttggagctcagggt
tctccttttggaacccaatcttctgcagcggcatttggaagcactagctttggccagtca
ccttttgggggtcaacgtgggggaagtagagtagctccttatacacctacaactgaagca
gatagtgggagcggtacacagccagctgcaaagttggagtcaatatcagcgatgcctgtt
tacaaagataaaagtcatgaggagctgagatgggaggactatcagttaggagataaaggt
ggaccgcagccagctgctcaaccttctggagggattggctttggtgtatcaactgcacct
acaaatccttttggttcttctccaacatttggtcagacatcttcaaatcctttttccagc
acaagtatcaatccatttagtctaaaacctccatcctttaatagtacaggttttacaacc
tcgactgctatatcaaatccttttcaatcgacatcatcaagcctttttggcccaacttcg
tcaacatcttcaatatttggttcctcttccactcctacatttggaaccagttcatctctt
tttagttcgtctgtcactccttcattttcaacttcaccatctatttttggtactggggca
gctccagctacaactccagcatttgctactggtttaaattttagcagcagtcagacatcc
cctcttttcaattctacccctgcaattgggcagacaagcaatgcttttgggcacatgacc
tctacgtttggacagaatgctagtaactttggtcaaacaagcattttcagcacaccttcc
actggatttagtgggaatatgttttcgagctctctatccttggctccttctagtaaccca
gctgccttcggcccaactactccctcttttgcttcaccttttcagacagctcagccagct
cagaccagtggtgctttcagctttagcaattttggtcatacacaatcaggtggtggattg
ggcatttttggtcagagtaatattggactatcgtctgctacgcagagtgctgctgtagta
caacccgtgactattacaaacccctatggaacactccctgcaatgcctcaaatatcattt
ggtcgggctgggactgcaccatctgttcaatatgggatttccagcatgcctgttgtggac
aaacctgctcctgttagaatatcgcccttactgacttcccgatacctttctcaaagacgg
attaggttgcctgctaggaaatatcattctaataatgatagcccaaaggttccatttttc
agtgatgatgaagagacacccagcacacctaaggctgatgctgtttttattcctagggaa
aatccaagggctctggtcattcatcccagagaaagttggccttcaaaagcttctgcagag
aaggcatctccattgaaggatgcatctactcgtgtgcaggagaatggtaaaatttctgat
gatggctccaatgctgaggataaagataaaaatccagctgaaaatggccttgtgaaggag
ccaattcatccagtcagaggtaaccagaaagccaacggagtgaatgataatcaatctgct
cagaaagaggactcatacttgacgctcagtggccatagagctggtgaggctgctattgtg
tatgagcatggagctgaaattgaggctctaatgccaaagctcagacggtctgattactat
acagaacctcgaatccaagaactggcggcgaaggaaagggcagaaccagggtattgtcgc
cgtgtcaaggattttgtggttgggcggcatggttatggaagcatcaagttcctgggtgag
acagatgtgagacgtcttgatctggagtcccttgtccagtttaacaatcgtgaggtgatt
gtttacatggatgacagcaagaaacctcctgttggacaaggtcttaataagcctgcagag
gtaacacttcttaacatcaaatgctttgataaaaagaccaggcaccagtatacagaaggg
ccaaaagtcgagagatataaggacatgcttaaaaggaaggcagaggaccaaggagcagag
tttctgtcttatgatcccatcgaaggagagtggaagttcagggtcaatcactttagcatg
tataagttggaagatgaagaggaagattactcagaaatgtgctctgttccagattgctgg
taa
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