Durio zibethinus (durian): 111291050
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Entry
111291050 CDS
T05242
Name
(RefSeq) DNA mismatch repair protein MSH2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111291050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111291050
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111291050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
BAR_4
Motif
Other DBs
NCBI-GeneID:
111291050
NCBI-ProteinID:
XP_022738331
UniProt:
A0A6P5YE72
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MDEISDEQNTLPELKLDAKQTQGFLSFFKTLPNDARAVRFFDRRDYYTAHGENANFIAKT
YYRTTTALRQLGSGSNGLSSVSVSKNMFETITRNLLLERTDHTLELYEGSGSNWRLVKSA
SPGNLGSFEDVLFANNDMQDSPVVVALLLNFRENGCTVGFSYVDLTKRTLGLAEFLDDSH
FTNLESALVALGCKECLLPMESGKSSECRTLNDALTRCGVMVTERKKNEFKARDLMQDLG
RLVKGSIEPVRDLVSSFEFAPAALGALLSYAELLADEGNYGNYSIWRYNLDSYMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHLWLKQPLLDVSEINSRLDLVQAF
VEDTELRQDLRQHLKRISDIERLMRNIEKTRAGLQHIVKLYQSSIRIPYIKSALEKYDGQ
FSSLIKERYLDPFELLTDDDHLNKFIALVETSVDLDQLENGEYMISPSYNDALSALKSEQ
ESLEHQIHNLHKQTAFDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTQFIVLE
TRKDGVKFTNTKLKKLGDRYQNVLEEYKNCQKELVNRVVQTTATFSEVFEPLAGLLSELD
VLLSFADLASSCPTPYTRPEITSPDVGDIILEGSRHPCVEAQDWVNFIPNDCRLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCEKASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATH
FHELTALAHKNANHESQKKQIVGVANHHVSAHIDSSSRKLTMLYKVEPGACDQSFGIHVA
EFANFPESVVALAREKAAELEDFSPTSIISTDAKQEEGSKRKRECDPGDVSRGAAKAHKF
LKEFADLPLESMNLKQALQHVSKLKDDLEKDALNCQWLRQFF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatttctgatgaacaaaacacgcttccggagctcaaattagatgccaagcag
actcaagggtttctttccttcttcaaaacccttcccaatgatgcaagggctgttcggttt
tttgatcgccgggattattatactgctcatggtgaaaacgcaaactttattgcgaagact
tattatcgtactactactgctctccggcaactcggtagtggctcgaatggcctttcaagt
gtaagtgttagtaaaaacatgtttgaaacgatcacccgtaatcttctcctggagagaaca
gatcacactctggagctctatgaaggcagtggctccaattggaggttggtgaaaagcgcc
agtcctgggaatctgggcagttttgaagatgttctctttgccaacaatgatatgcaagac
tcacctgttgttgttgcactgcttcttaacttccgtgaaaatggttgcactgttggtttt
agttatgttgatttaacgaagagaacacttggtttggctgagtttcttgatgatagtcac
tttacaaatttggagtcagctttggttgctcttggttgtaaggaatgtcttttacccatg
gagagtggaaaatccagtgaatgcagaactctaaatgatgctttgaccagatgtggtgtt
atggtaactgagagaaagaaaaatgagtttaaagcaagggatctgatgcaggatcttggt
agactagtcaaaggctccatagaaccagttcgagatttggtttctagctttgaatttgca
cctgctgctttaggagccttactatcttatgcagaattactagcagatgaaggcaattat
ggaaattatagcatctggagatacaatctggacagctacatgaggttagattctgctgca
atgagggcattgaatgtcctagaaagcaaaactgatgcaaacaaaaattttagtttgttt
ggccttatgaatagaacctgtactgctggaatgggtaagcgattgcttcatttgtggcta
aaacagcctttgttggatgtaagtgagataaactcaaggctagatttggtacaagctttt
gtggaggatactgagcttcgccaagatttgagacagcatctaaaaagaatttcggatatt
gagcgacttatgcgtaatattgaaaagacaagagctggtttgcagcatattgtaaaactt
tatcagtcaagtataagaattccatacattaaaagtgccctggaaaaatatgatggacag
ttttcatccttgatcaaggaaagatatttggatccttttgagctcttgactgatgatgat
catttgaacaagttcattgctcttgttgaaacttctgttgacctagatcaacttgaaaat
ggggaatacatgatttcacctagttataatgatgctctatctgcactaaaaagtgagcag
gagtcactagagcaccaaatacacaatttacataaacaaactgcttttgatcttgatctg
ccagtagacaaggcattaaagttagataagggcacacagtttggacatgttttcagaatt
acaaagaaagaagagccaaaagtaaggaagaagctctccacccaatttattgtccttgaa
acccgaaaggacggagtgaagttcactaacacaaagctcaaaaagttgggggaccggtac
caaaacgtacttgaggagtataagaattgtcaaaaagagctagtcaaccgagtggttcaa
actacagcaactttttctgaggtgtttgagcccttagctgggttgctctctgaattggat
gtcttacttagttttgcagatttagcttcaagttgccctactccatacacaagaccagaa
attacttcgccagatgtcggagatattatattagaaggaagtagacatccctgtgtggag
gctcaagactgggttaattttataccaaatgactgtaggcttgtaagaggaaagagctgg
ttccagatcatcactgggcctaatatgggtggaaaatcaacattcatccggcaggttggt
gttaacattctaatggcacaagtaggctcttttgttccttgtgagaaagctagcatttct
gtacgagactgcatttttgcccgtgttggtgctggtgactgccaactacggggagtttct
acctttatgcaagaaatgcttgaaactgcatcaatattgaaaggagctactgagaagtca
ttgataatcattgatgagttggggcgaggaacatcaacctatgatgggtttggtttagct
tgggccatatgtgagcatattgttgaagtgatcaaagcaccaactttgtttgctacccac
ttccatgaactgactgcattggctcataaaaatgccaatcacgagtcgcagaaaaaacag
attgttggtgtggcaaaccatcatgttagcgctcacattgactcatcaagtcgcaaattg
acaatgctgtacaaggttgagccaggggcctgtgatcaaagtttcggtattcatgtggca
gaatttgccaactttcctgaaagtgttgttgcccttgcaagagaaaaggctgctgaattg
gaagatttctcaccaacttcaatcatttcaactgatgctaaacaagaggagggttccaaa
aggaagagagaatgtgatcctggtgacgtatctagaggtgctgcaaaggctcacaagttt
ttgaaggagtttgctgatttgccgttggagtctatgaacctgaagcaggctctgcaacac
gtaagcaaactaaaggatgacctagaaaaggatgcattgaactgtcagtggctccggcaa
ttcttctag
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