Durio zibethinus (durian): 111291359
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Entry
111291359 CDS
T05242
Name
(RefSeq) cleavage stimulation factor subunit 50
KO
K14406
cleavage stimulation factor subunit 1
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111291359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111291359
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111291359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_NWD2_C
Cytochrom_D1
Ge1_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR41
WD_LRWD1
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
111291359
NCBI-ProteinID:
XP_022738771
UniProt:
A0A6P5YFD8
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MEGNSLEQTLQEGNLYRQLNCLIVAHLRHHNLTQAATAVASATMTPLDVEAPPNKLLELV
AKGLAVEKDETLRGVSSSTLFDLGTALAYGSIPDPRVSSVDFSALQDTKGSSKSFSKHET
RHLSEHKNIARCARFSPDGRFVATGSADMSIKLFEISKVKQMMLPDSKDGPVRPVIRTFY
DHVQPINDLDFHPQSTVLISGAKDHTIKFFDFSKATAKRGFRVIQDTHNVRSVAFHPSGD
FLLAGTDHPIAHLYDVNTFQCYLSANPPEIGVNGAINQVRYSSTGGMYVTASKDGAIRLW
DGVSASCARSIVGAHGTAEATSACFTKDQRFVLSCGKDSTVKLWEIGTGRLVKQYLGATH
TQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWPSNHIGAPRWIEHSPTEAAF
ISCGTDRSVRFWKEIL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcaacagcttggaacaaacactccaagaagggaacctttacaggcaactcaat
tgccttatcgttgctcatcttcgccaccacaatctcacccaagctgcaacagcagtggct
tcagcaacaatgacgcctttagacgttgaagcccctcctaataagcttcttgagcttgtt
gccaagggtcttgcagtggagaaagatgagacgttacgaggggtttcttcttctactttg
tttgatttggggacagctttggcttatggctcgattccggatcctcgggtttcttctgtt
gatttcagcgctttgcaggatacaaaaggctcatcaaagagcttttcaaagcatgagaca
aggcatctttctgaacacaagaacattgccaggtgtgcaaggtttagtccagacgggagg
tttgttgctactggaagtgctgacatgtcaattaaactctttgaaatatcaaaagtaaag
caaatgatgctgccagattcaaaggatggtcccgtgcgacctgtcatacggacattttat
gaccatgtacagccaataaatgatttggatttccatcctcagagtactgtgctgatatct
ggggcaaaagatcacacaataaagttctttgatttttccaaagctactgcaaagagaggc
ttcagagttatccaggatactcacaatgtacggtctgtagctttccatccatctggtgat
ttccttcttgcaggaactgatcatccaatagcacacttgtatgatgttaatacgttccaa
tgttatttatctgcaaatcccccggagattggtgttaatggagccataaatcaggtgagg
tattcttctacaggtggcatgtatgttactgcatctaaagatggtgctattcggttatgg
gatggagtaagtgccagttgtgcgcgctccatagttggtgcccatggaacagcagaggcc
acaagtgcgtgttttacgaaggatcaaaggtttgttctatcttgtggtaaggattctacc
gtgaagctttgggagataggcactggaagattggtcaaacaatatcttggagctacacac
acacaattaaggtgccaggctgtttttaatgatactgaagagtttgtgctatccatagat
gaacctagcaatgagattgttatttgggatgctttaacagcagaaaaagtggcaaagtgg
ccttccaaccacattggtgcacctcgttggattgagcactcaccaacagaggctgccttc
atatcttgtgggactgacagatctgttcggttctggaaggaaattctctga
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