Durio zibethinus (durian): 111291367
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Entry
111291367 CDS
T05242
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111291367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111291367
03012 Translation factors [BR:
dzi03012
]
111291367
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111291367
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111291367
Translation factors [BR:
dzi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111291367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
AAA_19
nSTAND3
Dicer_dimer
ATPase
PhoH
T2SSE
AAA_11
AAA_16
Myosin_head
Motif
Other DBs
NCBI-GeneID:
111291367
NCBI-ProteinID:
XP_022738781
UniProt:
A0A6P5YEH0
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MPCYSAIFQGYLRTTMSLRTTCLQLNNNPKTFLKPSFFSFHSRTQSLGSFRRLHLRHDLV
TCSRPGTAAASSRSLALDWRNTALPYLQLQQISNYGRYAYQDVSSDDSDHEFGSPQPQMG
ASTLDNIDEWRWKLTMLLRNKDEQEVVSRERKDRRDFEQLSALATRMGLHSRQFAKVVVF
SKLPLPNYRSDLDDKRPQREVILPFGLQRDVDLHLKAYLSHKDMSRGSFSDKPWSRSCAG
GRIAADEVPIEHQEFFTQNSDVMERILRRRSLQLRNKQQEWQESPEGQKMVEFRRSLPAY
KERDALLNAIQQNQVVVVSGETGCGKTTQIPQYILESEIEAARGASCSIICTQPRRISAM
AVSERVAAEKGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRDLRGVSHVIV
DEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLNAELFSSYFGGAPTIHIPGFTYPV
RAHFLENILEMTGHRLTPYNQIDDYGEEKMWKMQKQAQSLKKRKSRLTSAVEDVLEIADF
RGYSLRTRESLSFWNPDSIGFNLIEHVLCHMVKKERPGAVLVFMTGWDDINSLKDQLQVH
PLLGDPSKVLLLACHGSMPSSEQRLIFEKPEVGVRKIVLATNMAETSITINDVVFVVDCG
KAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQSGECYHLYPKCVYDTFADYQLPE
LLRTPLQSLCLQIKSLELGGITEFLSRALQPPELLSVQNAVEYLKIIGALDENENLTVLG
RNLSMLPVEPKLGKMLVLGAIFNCLDPIMTVVAGLSVRDPFLMPYDKKDLAESAKAQFSG
QEYSDHIALVRAYEGWKEAEREQSGFEYCWKNFLSAQTLKAIDSLRKQFFYLLKDSGLVD
QNIENRNKWSHDDNLIRAVICAGLFPGICSVVNKEKSIALKTMEDGQVLLYSNSVNAGVA
KIPYPWLVFNEKVKVNAVFLRDSTCVSDSMLLLFGGNISRGGLDGHLKMLGGYLEFFMKP
AFADTYLSLKRELEELIQKKLLNPASDMESSNELLSVVRLLISEDQCEGRFVFGRQVPAS
SKNTTIVKTPAIGGVDNSKSQLQTVLARAGHGAPIYKTKQLKNNQFQSTVILNGLDFMGQ
PCSSKKLAEKDAAAQALLWLRGEDHSSSREIDHASLLLKKSKKSRRTSVSDTKWSIKWS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgccctgttactcagctatatttcagggctatctcaggacaaccatgtctctgagaacc
acttgcctccaactcaacaataaccctaaaacctttttaaaaccttctttcttctccttt
cactccaggactcaatcactgggttctttccggcgtttgcatttgaggcatgacctcgtc
acctgctccaggcctgggaccgctgctgcttcctccagaagtcttgccttggattggagg
aacactgctttgccttatttgcaactgcagcaaatctctaattatggccgctatgcttac
caggatgtttccagtgatgactcggaccatgaattcgggtctccacagcctcaaatgggt
gcttcgacccttgacaatattgatgaatggagatggaaattgactatgcttctgcgtaac
aaagatgagcaagaggtggtatctagggagagaaaggacaggcgtgactttgagcaactt
tcagctctagcaactagaatgggcttacatagccgtcaatttgcaaaagtagttgttttt
agtaaacttccactgccaaattatagatctgatcttgatgataagcgcccacaaagagag
gtaatcttacctttcggcctgcaaagagatgtagaccttcacctcaaagcttacctttct
cataaggatatgagcagaggtagcttttcagataaaccttggtcaagatcatgtgctggt
ggaagaattgctgcagatgaagtacctattgagcatcaagagttctttacacaaaatagt
gatgttatggagagaattcttcggcggagaagtctgcaactacgtaataagcaacaagaa
tggcaggagtcccctgaaggccaaaagatggttgaatttcgtagaagcctgcctgcatat
aaagagagagatgcattgctaaatgctatccaacaaaatcaggtggttgttgtctctggt
gaaactggctgtggtaaaactacacaaattcctcagtacatattagaatctgagattgaa
gctgctcgtggagcttcctgtagtattatatgtactcagcctagaagaatatctgctatg
gctgtctccgaaagagttgctgcagaaaaaggggagaaattgggagaatctgttggttat
aaagtacgccttgagggaatgaaagggagagacacccgccttcttttttgtacaactggc
attttacttaggcgactacttgttgatagagatttgagaggtgtaagtcatgttattgtt
gatgagattcatgaacgtggaatgaatgaagattttcttcttattgtgttgaaagatctc
cttcctcgtaggccagagttgaggttgattttgatgagtgcaaccttaaatgccgagcta
ttttcttcttactttggtggtgccccaacaatccatattccgggttttacatatcctgtc
cgagcgcatttcctcgagaatattctagagatgactgggcacaggttaactccatataat
caaattgatgattatggtgaagaaaagatgtggaaaatgcagaaacaggcccaatctctt
aaaaagaggaagagtcggctaacttctgcagttgaggatgtacttgaaattgctgacttc
agggggtatagtttgcgaactcgggagtctttatccttttggaatcccgactcaattggt
ttcaatctcattgagcatgttctttgccacatggtaaagaaagagaggcctggtgctgtt
ttggttttcatgactggttgggatgacatcaactctctaaaagatcagctccaggttcat
cctctcctaggggatcctagcaaggtgttgttgcttgcatgccatggttccatgcctagc
tctgagcagaggttaatatttgaaaagcctgaagttggagtgaggaaaatagttctagct
actaatatggccgagactagtatcactatcaatgatgtggtttttgtggttgattgtgga
aaggctaaagaaacatcctatgatgcactaaataatactccttgtttgcttccatcttgg
atatcaaaggctgctgcccggcagagaaggggacgagctggtcgtgttcaatctggcgag
tgttaccatctctatcccaaatgtgtttatgatactttcgctgattatcaacttccagag
cttttaaggacaccattacagtctttatgtttgcaaatcaaaagtctagagcttggaggt
atcacagagttcctgtctagggcattgcagcctccagaacttctgtcggtacaaaatgct
gttgaatatctgaagattattggagctttagatgagaacgagaacttgacagtgctagga
cgcaacttgtcaatgcttccagttgagcctaaacttggaaaaatgctggttctgggggct
attttcaactgtttagatccgataatgactgttgttgctgggctcagtgtcagagatcca
ttcctgatgccatatgacaagaaggatcttgctgaatcagcaaaagcccaattctcgggc
caggagtacagtgatcatattgcacttgtccgagcctatgagggttggaaagaagctgaa
agagagcagtctggttttgagtattgttggaagaattttctatctgcacaaactctcaag
gccattgactctctaagaaagcagttcttctatttgctcaaggatagtggtctagttgat
caaaatatagagaaccgcaataaatggagccatgatgataatctcatcagggcagtcatt
tgtgctggcttgtttccagggatatgctctgttgtgaacaaagagaagtcaattgcactg
aaaacaatggaggacggtcaagttcttctgtactcgaattcggtgaatgctggagttgcc
aaaattccatacccatggctggttttcaatgaaaaggtaaaagtgaatgcagtattcctc
cgtgattcaacttgtgtttctgattccatgctgctcttatttggagggaacatttctaga
ggtggactagatggacatctaaaaatgttgggaggatatttggagttcttcatgaaacct
gcttttgctgatacatatttaagcttgaaaagagagctcgaggaactaattcagaagaaa
cttttgaaccctgcatcagatatggaatcaagcaatgagctcctctcagtagtaagattg
ctgatctcagaagaccaatgtgaaggcagatttgtctttggtcgtcaggtgccagcatcg
tcaaagaatacaactatagtgaaaacaccagctataggtggggtggataattctaagagt
cagctgcaaacagtgcttgccagggctggacatggagcacccatctacaagacaaaacag
ctaaagaacaaccagttccaatccactgtgatcttaaatgggctggattttatggggcag
ccttgcagcagcaagaagcttgcagaaaaggatgcagctgctcaagctctgctgtggttg
aggggtgaagaccattcatcttccagagagattgaccatgcatcattgcttttgaaaaag
agcaaaaaaagcaggagaacttcagttagtgatactaagtggagtattaagtggagttaa
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