Durio zibethinus (durian): 111291646
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Entry
111291646 CDS
T05242
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111291646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111291646
03012 Translation factors [BR:
dzi03012
]
111291646
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111291646
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111291646
Translation factors [BR:
dzi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111291646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
R3H
DEAD
HA2_C
HA2_N
Ank_2
nSTAND3
ATPase
ResIII
AAA_19
Ank_5
ABC_tran
AAA_23
Ank_3
AAA_22
Rad17
AAA_7
AAA_16
Motif
Other DBs
NCBI-GeneID:
111291646
NCBI-ProteinID:
XP_022739199
UniProt:
A0A6P5YFB8
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MGKKKTVSETSMIRLPKILEKFREAEDEVYTFESNLSNKERAVVHKACRKMGMKSKSSGR
GSQRRVSVYKIKGKIDNMTGKESLTKVTFSEGAKMVLQDLFINYPPDDEELEEKVISKYS
GKTAKIRRKKDDIFSKPLMTDADIVEKIKTLASRREKDPNLRQINEERSKLPIASFRDTI
TSTVESHQVVLISGETGCGKTTQVPQFLLDHMWGKGEACKILCTQPRRISATSVSERISY
ERGENVGDDVGYKIRLESRGGRHSSIVFCTNGVLLRVLVSNSRSKREDISDMTHIIMDEI
HERDCYCDFMLAIIRDILPSYPHLRLVLMSATLDAERFSQYFGGCPIIRVPGFTYPVKAF
YLEDVLSILKSADNNHLISANASVPDEDPELTEEDKVALDEAIDLAWSSDEFDPLLDMVS
VEGGSKVHNYQHSLTGLTPLMVFAGKGRVDDVCMLLSFGVNCHLISKDGNRALEWAEQGN
QQEAAEIIKKHMQSLCYDFGGQQLLHKYIAAVDPEIIDVVLIGQLLMKICIDSNEGAILV
FLPGWEDINRTKEKLLANHFFKDSSRFVIIPLHSMVPSAEQKKVFKRPPLGCRKIVLSTN
IAESSITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSAWVSKANAKQREGRAGRCQPGICY
HLYSKLRAASMPDFQVPEIKRMPIEELCLQVKLLDPNCKVEEFLQKTLDPPVSESVRNAV
SVLQDIGAFSHDEELTELGEKLGYLPVHPLTSKMLFFAILMNCLDPALTLACASDFRDPF
VLPMRPNEKQKAAAARHELASLYGGQSDQLAVIAAFECWKNAKQRGLEGRFCSQYFVSSS
TMNMLFGMRKQLQAELIRYGFIPDDVSSCSLNSNHPGIVHAVLVAGLYPMVGRMLPARQG
KRFFVEAAGGSKVRLHSQSINSKLLLKQSDDCPLIIYDEITRGDGGMFIRNCTVIGPLPL
LLLATEIAVAPAKVSDDNDNDDDGGGGGGDDDDDDDGSDDADVCDYDGDEMLMVSKSGGN
EEKVMSSPDNSVIVVVDRWLSFRSTALDVAQIYCLRERLSAAILFKVMHPRQVPPPVLGA
SIYAIACVLSYDGLSGISTQLESVDSLTMRVRATDINKPVPGRKGMGPIPSRFLLSLVNQ
SPFDASTYRKAKVPAVEAITNGIEPSSCNQQSTVMSVGRSLDQVSSEGPISVASGSGASK
LQGPRGESCKRQRVKRSKSKDGRQ
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaagaaaaccgtatctgaaacctcgatgattcgattacccaagatacttgag
aagtttcgcgaagcagaagatgaagtgtatacatttgaatccaacctttcaaataaagag
cgagcagtggtacacaaggcatgccggaaaatgggcatgaaatccaaaagttctgggcgt
gggagccagagacgtgtttctgtctacaaaatcaaagggaaaatcgacaatatgacaggg
aaggagagtcttactaaggtgacattttcagaaggggcaaaaatggttttgcaggactta
tttataaattatccacctgatgatgaagagctggaagagaaagtaatcagcaagtatagt
ggaaaaactgctaaaatacgaagaaagaaagatgatattttctccaagccattgatgact
gacgcagatattgtagaaaagattaaaacccttgcatctaggagagagaaggatccaaac
ttgagacagattaatgaagagaggtcaaagcttccaattgcttcatttagggataccatt
acatccacagtagaatctcaccaggttgtcctcatatctggtgagactggctgtggaaag
accacgcaggttccacaatttcttttggaccatatgtggggaaaaggtgaggcctgtaaa
attctgtgtactcagcctcggcgtatatcagctacttcagtgtctgagagaatctcttat
gaaagaggagaaaatgttggagatgatgttggatacaagattcgcttggaaagtagaggt
ggtcggcactcatcaattgtcttctgcacaaatggggtgttattgagggtgctggtttcg
aacagtaggtcgaagagagaagacatttctgacatgactcacattattatggatgaaatt
catgaaagggactgctactgtgatttcatgttggcaattatcagggatatacttccttca
tatcctcatctacgactggtattaatgagtgctactcttgatgccgagcggttttcacag
tattttggtggttgcccaattatccgtgttcctgggtttacatatcctgtaaaagctttc
tatttggaggatgtgctttctatcttgaaatctgcagacaataatcatcttatttcagct
aatgcaagtgtcccagatgaagacccagaattaacagaagaagataaggttgcattagat
gaagctattgatttggcttggtcaagtgatgagtttgatccccttctagatatggtttct
gttgaaggggggtcaaaggttcataattaccagcattctttgactggactaacgccatta
atggtgtttgctggaaagggtagagtggatgatgtttgcatgctcctctcatttggtgtg
aactgccatctaatctccaaggatgggaatagggctttggagtgggctgagcagggaaac
cagcaggaagctgctgaaataataaaaaaacatatgcaaagtctctgttatgattttggg
ggacaacagttactgcataagtatatagcggctgttgatccagaaattattgatgttgtt
cttattgggcagttattaatgaagatatgtattgattcaaatgaaggagctatccttgtt
ttccttcctgggtgggaggacataaatagaacgaaagagaaattacttgccaaccacttt
ttcaaagattcttctagatttgttataatacctctgcattcaatggttccatcagcagag
caaaagaaggtctttaaacgtccacctctgggctgccgtaaaattgtcctttcaaccaat
attgctgaaagttccattacaattgatgatgttgtctatgttatagacagtggtcgaatg
aaagagaaaagctatgatccttataataatgtatcaacccttcagtctgcatgggtttcc
aaagcaaatgccaagcagcgagagggtcgagcaggcagatgtcagcctggaatttgttat
catctttattcaaaacttagagcagcttctatgccggattttcaagttccagaaattaag
agaatgccaattgaggagctttgtttacaggtgaaattacttgacccaaattgcaaagta
gaggaattcttgcaaaagacattggaccctcctgtttctgaaagtgtacgtaatgcagtt
agtgttcttcaagatattggggctttctcacatgatgaggaactgacagaacttggagag
aagcttggttatcttcctgttcatccattgacaagcaagatgcttttctttgcaatattg
atgaactgccttgatccggctttgaccctagcatgtgcctcagacttcagggatccgttt
gtccttcccatgcggccaaatgaaaaacagaaggctgctgctgctaggcatgagcttgca
tcattgtatggtggacaaagtgatcagctggcagtcatagctgcttttgagtgttggaag
aatgcaaaacaaaggggtctagaaggacgtttttgttcacaatactttgtctcatcaagc
accatgaatatgctgtttggcatgcgtaagcagcttcaggctgaactaatacgttatggg
tttattccggatgatgtatcaagttgtagtctgaattcaaatcaccctggaatagtccat
gcagtccttgtggctggtttatatccaatggtggggaggatgctccctgcaagacaaggt
aaacgattttttgtagaggctgctggtggcagtaaagtgcgtttacattctcagtcaatt
aattctaagttattgcttaagcaatctgatgattgcccgttgattatatatgatgaaata
acccgtggggatgggggtatgttcataaggaactgtactgtcattgggccacttccattg
ttacttcttgcaacagagattgcagtggctcctgcaaaagtctctgatgacaatgacaat
gatgacgatggtggtggtggtggtggtgatgatgatgatgatgatgatggaagtgatgat
gctgatgtgtgtgattatgatggagatgaaatgttgatggttagtaagtccggtggaaat
gaagaaaaggtcatgtcctctcctgataattctgttatagtagttgttgatcggtggctt
tcattcagatcaacagcacttgatgttgctcaaatctactgcttgagagaacgattatct
gcagcaatcttattcaaagtaatgcatccacgccaagttcctcctcctgttcttggggct
tccatatatgcaatagcctgcgttctatcgtatgatgggttatctggcatctcaacgcaa
ttggaatctgtggattcactgactatgagagtgcgtgctactgatatcaacaaacccgtg
ccagggaggaaaggtatgggtcccattccgagtagatttcttttatcacttgtgaaccaa
agcccattcgatgcttcaacttaccggaaagctaaggtccctgcagttgaggctataaca
aatggaattgagccctcaagttgcaaccaacaatcaacagtaatgtcagttgggaggagc
ctagatcaggtttcatcagaaggccctatatcagttgcttctggttcaggtgcgtctaaa
ttacagggtcctaggggagaatcatgtaagcgtcaacgtgtgaaaaggtccaagtccaaa
gacggtagacagtga
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