Durio zibethinus (durian): 111291746
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Entry
111291746 CDS
T05242
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111291746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dzi03041
]
111291746
03009 Ribosome biogenesis [BR:
dzi03009
]
111291746
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111291746
Spliceosome [BR:
dzi03041
]
Complex A
U1 snRNP components
U1 related factors
111291746
Complex B
111291746
Ribosome biogenesis [BR:
dzi03009
]
Eukaryotic type
Pre-60S particles
Helicases
111291746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111291746
NCBI-ProteinID:
XP_022739441
UniProt:
A0A6P5YGE0
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MAATATASSAGPRYAPPDPTLPKPWKGLVDGKTGYLYFWNPVTNVTQYERPTSVDSAPKS
SSVPMGSSVQVQQSSQGRHGYSPDKENDQYGRGSNAISKLEPVSRSNQNARGGAVHSHNT
PNGTSSSVIGGSSARGHGSMAGGSNLSGDVYRRQHEITVTGDEVPPPFSSFESTGFPSEI
LREVHNAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLIPGFMHLKRCHNDPQM
GPTVLVLSPTRELATQIQDEAHKFGKSSRISCTCLYGGAPKGPQLREIERGVDIIVATPG
RLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPREV
RKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMEKHRRLEQILRSQEPGSKIIIF
CSTKKMCDQLARNLSRQFGATAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAARGLDIK
DIRVVINYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDSKYASDLIKVLEGANQRVP
AELRDMASRGGGMGRPRRWASSTGGRDGGRGGHTDSGYGGRDGGRGGRGISTSSSWHERS
GGRGYDHESRDRYGRGFHDSYDKGRSRSSGRDRSRSRSIDKYDNAAGRERSPVRSFHEVM
MKRDRLSPPRQRGLPHNNENSRDHKTFRDSRSPPRERSRSPYGGGSGRDNFGGSYGDSRT
GFRDEEEGMIRPDH
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactgcgactgcctcttctgctggtccacgatatgctccgccagaccctact
cttcccaaaccatggaaaggcctagttgatgggaaaactggttatctatacttttggaat
ccagtaacgaatgtcacgcaatatgagaggcctacaagcgtagattctgccccaaaatct
tcttctgtgcctatgggttcttcagttcaagttcagcaatcttctcaaggacgtcatggg
tatagtcctgacaaggaaaatgatcagtatggaagaggtagcaacgctatatcaaaactt
gagccagtatcaaggagtaaccagaatgcaagaggtggagcagtgcattcccataataca
cctaatgggacttccagctctgtgattggaggatcttctgctaggggacatggatcaatg
gctgggggatctaatttgtccggtgatgtttatcgccgtcagcatgagataacagtaact
ggagatgaagtgcccccacctttttcatcatttgaatctactggcttcccttctgagata
cttagagaggttcacaatgctgggttttctgctccaaccccaattcaggctcagtcgtgg
ccaattgcattgcaaggtagagacatagtggccattgcaaaaacaggttctgggaaaaca
ttgggttacctaattcctggatttatgcatctcaagcgttgccacaatgatcctcaaatg
ggtccaactgtgttagtattgtcaccaacaagggagttggctactcagatacaagatgaa
gctcacaagtttgggaagtcatcaagaattagttgcacatgtttgtatggaggagcacca
aaaggtcctcaattgagagagattgagagaggggtagatatcattgttgccactcctggc
cggttaaatgatattctagagatgaggagaatcagcctccatcaagtttcttaccttgtg
ttagatgaggctgatcgaatgttagacatgggttttgaacctcaaatacggaaaattgtg
aaagaagtgcctactcgcaggcagactctcatgtacactgcaacatggccaagggaagtc
cggaaaattgcagcagatctactggtaaatcctgttcaggtcaacattggcaatattgat
gagcttgtggcaaacaagtctattacgcagtatgttgaagtattatcaccaatggaaaaa
cacagaagattggagcagatactgcgctcccaagaaccaggatccaagattattattttt
tgttcaaccaagaagatgtgtgatcaactcgctcgaaacctcagtcggcaatttggagct
actgctatccatggagacaaatctcaggctgacagggactatgtactaagtcagtttcgc
actgggaggtcaccagtgcttgttgctactgatgttgctgctcggggattggacattaaa
gacatcagggtggtaatcaactatgacttccctactggagttgaggattatgttcatagg
attgggaggactggaagggcaggtgcaactggattggcatatacattctttggtgatcag
gattcgaagtatgcttcagatctcatcaaagttctagaaggagcaaaccagcgggtacct
gcagaacttcgtgatatggcttcacgtggtggtgggatgggaaggcctagacgttgggct
tccagtactggtggccgtgatgggggacgaggtggacatactgattcagggtatggtggt
agagatggtggaaggggtggtcgtggaatttctacatcttctagctggcatgagagaagt
ggaggacgtggatatgatcacgagtctcgtgacaggtatggtcgtggcttccatgatagt
tatgataaaggacgaagtcgcagcagtggccgtgaccgcagtcgaagtcgtagcattgat
aagtatgataatgctgctggacgtgaacgttcccctgtgcgcagttttcatgaagtgatg
atgaaacgtgatcggttgtcaccgcccaggcagcgtgggctccctcacaataatgagaat
tcaagggaccacaaaacttttcgtgattcgcggagccctccccgtgagaggtcaaggtca
ccttatggtggtggtagcggaagggataactttggaggatcgtatggagattctcgtaca
ggttttagggatgaggaggaaggcatgatacgtcccgatcactga
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