Durio zibethinus (durian): 111292480
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Entry
111292480 CDS
T05242
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111292480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111292480
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111292480
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111292480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
111292480
NCBI-ProteinID:
XP_022740624
UniProt:
A0A6P5YJB4
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MRGLQLPLNQTQRVRLQRAFEKLHSLSSKANSDASVTVADAIPVNYEDAFLKGHGTMDLN
GELVATVCGVVEGVNKLVYVRALRARYKPEVGDIVVGRVVEVAQKRWRWEINFSQDAVLM
LSSMNMPDGIQRRRTALDELNMRSIFEENDVVCAEVPNFQHDGSLQLQARSQKYGKLEKG
QLLIIDPYLVKKSKLHFHYLEQFGVDLILGRNGFIWVGEHVEARDSVLVNQPSSSEQSTV
PEEKNQAYTPLEMRQNICRIANAVRVLSTLGFNVDADLIMETVELSSAVNIDIHDMLGSE
FHVLVAEKEAVHRSLMTKRIR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagaggattacagctcccgttaaaccaaacgcaaagagtaagacttcaaagagcattc
gaaaagcttcattctctctcgtctaaggccaattccgacgcttctgttaccgtcgccgat
gctattcctgtcaactacgaagacgcttttctcaagggacatggaacaatggacctcaac
ggcgaattggtggcaactgtctgtggcgtggtggagggcgtcaacaaactggtctatgta
cgcgccttacgcgctaggtacaagccagaggttggggatattgtagtggggcgtgtagtg
gaggttgctcaaaagcggtggagatgggaaattaatttcagccaagacgcagttttaatg
ctttcttcgatgaacatgcctgatggtattcagaggcggcgaactgctttggatgaactc
aacatgcgtagtatttttgaagagaatgatgttgtctgtgctgaggttcctaatttccag
catgatggcagcttacaactgcaggcaagaagtcagaaatacggaaagcttgagaagggc
cagttactcataattgatccttacctggtgaagaaaagcaaactgcatttccattacctt
gaacagtttggcgttgacttgatacttggacgaaatggattcatatgggttggcgaacat
gttgaagccagagacagtgtgttagtgaatcaacctagtagttctgaacaatccacagtt
cctgaagaaaaaaaccaagcttatacccctctagagatgaggcagaacatatgcagaatt
gcaaatgctgttcgtgtattgtctactttaggtttcaatgtagatgcagatttgatcatg
gagacagttgagttgagcagcgctgtaaatattgatatacatgacatgcttggatcagaa
tttcatgttctggttgcagaaaaggaagctgtacatagaagcttgatgacaaagaggata
agataa
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