Durio zibethinus (durian): 111292890
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Entry
111292890 CDS
T05242
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
KO
K14962
COMPASS component SWD2
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111292890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111292890
03036 Chromosome and associated proteins [BR:
dzi03036
]
111292890
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111292890
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
111292890
COMPASS/SET1 complex (yeast)
111292890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_SPT8
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
eIF2A
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
KNTC1_N
Beta-prop_WDR35_TULP_N
Nucleoporin_N
Cytochrom_D1
VPS11_N
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
111292890
NCBI-ProteinID:
XP_022741247
UniProt:
A0A6P5YLN6
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MACLGPQSEREEKVSLELTEEILQSMEIGMVFKDYSGRISSMDIHRTSNYLVTASEDESI
RLYDVSSATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK
GHHDRVVSLSLCSRNECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAISYDDQGLVFAI
AFGGYIRMFDARKYEKGPFEIFSVGGDLSNANVVKFSNDGRLMLLTTMDGHIHVLDSFRG
TLLSTYNVKPVSSNCTLEASFSPEGMFVISGSGDGRAYAWSVRSGKEVASWMMNSEPSVL
NWNWMSTDTEPPVIKWAPGSLMFVTGSTELSFWIPDLSKLAAYVGRK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcttagggccgcaatctgagagagaagagaaagtatcgttggaactcacggaa
gaaatccttcaaagcatggaaatcggcatggtttttaaggattatagcggtagaatcagt
tcaatggatattcatagaacatcgaattatttagtaactgctagtgaagatgaatccatc
cgcctttatgatgtttccagtgccacatgtttgaaaacaattaatagcaaaaagtatggg
gttgatctagtttgctttacttcgcatccaacaacagttatttactcttcaaagaatggt
tgggatgaatcattgcgacttctctcattgcacgataacaagtacttgcggtattttaaa
ggtcaccatgacagagtcgtttcacttagcctatgctcacgaaatgaatgtttcatctct
ggttcccttgatcgaactgttctgctttgggatcaacgcgcagagaaatgtcagggtctt
ttacgggtgcaaggcaggcctgccatatcttatgatgatcaagggctagtctttgctatt
gcctttggaggatacatcagaatgtttgatgctcgcaagtatgaaaagggtccttttgaa
atcttttctgttgggggggatctatctaatgctaatgttgtaaagttcagcaacgatgga
cgactcatgcttttgacaactatggatggacatattcatgtgcttgattcatttcgtggc
acacttttatctacatacaatgtgaagccagtttctagcaattgcacattagaggcatct
ttcagccctgagggaatgtttgttatatcaggttcaggtgatggtcgtgcatatgcttgg
agtgtaaggagtggtaaagaagttgcaagttggatgatgaatagtgaaccttctgtctta
aattggaattggatgagcactgatactgagcctcctgttattaagtgggctcctgggagt
cttatgtttgtaactgggtctaccgagctatcattttggattccagatctgtctaaattg
gcagcatatgttggaaggaagtag
DBGET
integrated database retrieval system
