Durio zibethinus (durian): 111293099
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Entry
111293099 CDS
T05242
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111293099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dzi04131
]
111293099
Membrane trafficking [BR:
dzi04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
111293099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
Clathrin
zf-HC5HC2H
TPR_MalT
AlaDh_PNT_N
zf-HC5HC2H_2
DUF2175
Motif
Other DBs
NCBI-GeneID:
111293099
NCBI-ProteinID:
XP_022741563
UniProt:
A0A6P5YM21
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MPFGNVYSQEQNSNDFRRDHTQTEKMVHSAYDSFELLSDCPTKIDAIESYGSKLLLGCSD
GSLRIYGPDSSGADRSPSSDQHALRKEPYALERTVAGFSKKALLSMEVLESRELLLSLSE
SIAFHRLPNLETIAVITKAKGANVYSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKDFG
VPDTVKSMSWCGENICLGIRKEYMILNATNGALSEVFSSGKIAPPLVVALPSGELILGKE
NIGVFVDQNGKLLQADRICWSEAPTVVVIQMPYAIALFPRRVEIRSLRVPYPLIQTIVLH
NARHVIKSNNAVVVALENSVYGLFPVPLGAQIVQLTASGNFEEALALCKLLPPEDASLRA
AKEGSIHIRYAHYLFDNGCYEEAMEHFLASQVDITYVLSFYPSIVLPKTNSVPEPEKLMD
LSLDASHLSRGSSGLSDDLETLLPQLSESDENAALEFKKMSHNTLMALIKFLQKKRYSIV
EKAAAEGTEEVVLDAVGDNFASTRFKKSNKGRGNIPINSAAREMAAILDTALLQSLLLTG
QSSAALELLKGLNYCDVKICEEILQKGNHYAALLDLYRSNSMHREALKLLHQLVEESKSN
QSQAELIQKFSPEAIIEYLKVMEALGLLGNACQPLCGTDPMLVLEFSMLVLESCPTQTIE
LFLSGNIPADLVNSYLKQHAPNMQGRYLELMLAMNENGISGNLQNEMVQIYLSEVLEWYS
ELSAQQIWDEKAYLPTRKKLLSALESITGYNPEALLRRLPPDALFEERAILLGKMNQHEL
ALSLYVHKLQVPELALAYCDRVYESVVHQPPIKSSGNIYLTLLQIYLNPQKTTKNFEKRI
TNLVSSPNTSIPKLGSSASIKGKGGRKKIASIEGAEDMRISPSNTDSGRSDGDAEESSGE
GGSSIMLDQVLDLLSRRWDRINGAQALKLLPRETKLQLQNLLPFLGPLLKKSSEAYRNFS
VIKSLRQSENLQVKDELYNQRKAVVKISSDSMCSLCNKKIGTSVFAVYPNGKTLVHFVCF
RDSQSMKAVAKGSPIRKR
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttggcaatgtttattcccaagagcaaaactccaatgatttcagaagggaccat
acacaaaccgaaaaaatggtgcacagcgcctatgattcctttgagctcctcagcgattgt
cccactaaaatcgacgccatcgaatcctacggctcgaagctcctgctcggctgctccgat
ggatcccttcgaatctacggtccagattcctccggcgcagacagatctccatcgtccgat
cagcacgcgttgcgaaaggaaccttacgcactggagagaaccgttgcagggttttcaaag
aaggctctgctttcaatggaagtattggaatcgagagagctattgttatccctctctgaa
tcgatcgcttttcatcggctccccaatttggaaaccattgctgtgatcaccaaagctaaa
ggcgctaatgtctactcttgggacgaccgtagaggcttcctatgctttgctaggcaaaag
agagtctgtattttcaggcacgacggagggcgagggtttgtggaggtgaaagattttggt
gtaccagatacagtgaagtcaatgtcatggtgtggtgagaacatatgtctaggtattaga
aaggaatacatgatattaaacgccacgaatggtgcattgtcagaggtgttttcttcgggg
aagatagctccacctttggtggttgctcttccctctggagaacttattcttgggaaggaa
aatattggagtctttgtggatcaaaatggaaagcttcttcaagctgatagaatatgttgg
tcagaagctcctactgttgttgtcatccagatgccatatgcaatagctctgtttccgagg
cgggttgagattcgatctcttcgagttccatatccattgatacaaacaattgtcctccat
aatgctcgtcacgttattaaaagtaacaatgctgttgttgtagcattagaaaattctgtt
tatgggctcttccctgttcctcttggtgcacagattgtccaattaacagcatctggaaat
tttgaggaagcattggccttgtgtaagctgcttccaccagaagatgcaagccttagagct
gcaaaggagggatcaattcatataagatatgcacattatctttttgacaatggatgctat
gaggaggcaatggagcactttttggcatctcaagtagatattacttatgtgctttctttt
tatccatccattgttcttcccaaaacaaattcagttccagaaccggagaagttgatggac
ctttctctggatgcttcacatctatcaagaggttcatctggtctgtcggatgatctggaa
accttgcttccacaactatccgaatctgatgaaaatgcagcacttgagttcaagaaaatg
agccacaacactctcatggctcttattaagttcctacagaagaagagatacagtattgta
gagaaggctgctgctgagggaacagaagaggtagttttagatgctgttggggataatttt
gcatcgactagatttaagaagtcaaataaggggcgtggtaacattcctattaactccgct
gctagggagatggctgcaatacttgatacagccctcctccaatccctgcttcttactgga
caatcatcggcagctttagaattgctgaaaggtcttaactactgtgatgtaaaaatatgt
gaggagattcttcaaaaaggaaatcattatgcagctttgttagacctttacagaagtaac
tcaatgcatcgtgaagctctaaaacttctacaccaattagtagaagagtcaaaatcaaat
caatcacaagctgagcttatccaaaagttcagtcctgaggcaattattgaatatctgaag
gttatggaagcattgggccttttgggcaacgcatgtcagcctctctgtggcacagatccc
atgcttgtccttgagttctcgatgcttgttcttgaaagctgtccaacacaaaccattgag
ctttttttgtctggaaatattccggcagacttggtcaactcttatttgaagcagcatgct
ccaaacatgcagggcagatacttggagcttatgcttgcgatgaatgaaaatgggatctca
gggaacctgcaaaatgaaatggtacaaatatatctctctgaagtacttgaatggtactca
gagttaagtgctcaacagatatgggatgagaaggcttatttaccaactcgaaagaaatta
ttgtctgcgttggaaagcatcacaggatataatccagaggctttgttgagacgtcttcct
ccagatgctctatttgaagagcgtgcgattttgttgggaaaaatgaaccaacatgagctt
gcactatcactatatgtacataagcttcaagtacctgaactggcactggcctattgtgat
cgggtttacgagtctgtggttcatcaaccaccaataaaatcttccggcaatatatacctc
actcttttacagatttatctgaatcctcaaaaaacaaccaagaacttcgaaaagagaatc
acaaatttggtatcatccccaaatacaagcatcccaaagcttggttcttcagcttcaatt
aaaggtaaaggaggacgtaagaaaatagcctcaatagaaggtgcagaggatatgcgtatt
agtcccagcaatactgatagtggtaggagtgatggtgatgctgaagaatctagtggggaa
ggaggttcttctatcatgcttgatcaggtacttgatcttttgagccgaaggtgggataga
atcaatggagctcaggcactcaaactcttaccgagggagactaaactacagctgcagaac
ttgcttccgtttctgggacctcttctgaaaaaatccagtgaagcatacaggaacttctct
gttatcaagagcttgaggcagagtgagaacctacaggtgaaagatgaactctacaaccaa
cgaaaagcggtggttaagatctcaagtgacagtatgtgctctctctgcaacaagaaaata
ggaacaagcgtatttgctgtctatccaaatgggaaaacactggtccactttgtttgcttt
agagattcgcagagtatgaaagcagtagcaaaaggctcaccaataaggaagcgatga
DBGET
integrated database retrieval system
