Durio zibethinus (durian): 111293117
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Entry
111293117 CDS
T05242
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111293117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dzi03009
]
111293117
Ribosome biogenesis [BR:
dzi03009
]
Eukaryotic type
Pre-60S particles
RNases
111293117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
111293117
NCBI-ProteinID:
XP_022741598
UniProt:
A0A6P5YM55
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MDEKLETAEKKVLVEIVKLVQKRGLEGTKGGWKDFLNTYDRKLGASLSDPSRRSNDVLVS
FLKTFAKDDDLKLFDRVLQSHSNRNIVEQFRKQSQDNESPEQRLVRLTLEHPQYPLDYMF
PTGDEEWIVTQPPKKSRMMKSNSMVAVDCEMVLCEDGTEALVRVCVVDRDLQVKIDELVK
PNKAVADYRTEITGVAAGDLDGVTCSVVDIQKSMKKLLSNGTILVGHGLQNDLQVLKIDH
ARVIDTSYIFKYLDAPIYRKPSLNNLCKSLLGYEVRKPGAAHNCLDDACAAMKLVLAKLE
RGDIPLVQEDVTQPEMEKLLLHRIPINVHKEEISRVIPGAVAIEEKPSKKVQGRHYSAFA
VFNSPQEANQAFENVDGNEEKDSSGLPQKLVRFLFGKGVTASLYIRKMAQDDFHHQLLSN
KRAFQGEEKSSESKKLKTDQKIVETRENSNQLDDHLNEIERLKQELNEKYARIVWLEKSI
ESDKVKTDQKTVEVTTATSNQLDGHLKEIERLKQELKEKDSRIVLQDKMISNLLKKVDEM
KKVPKKTK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaaactcgaaacggccgagaaaaaggttcttgttgaaatcgtgaagttagtt
caaaagagaggactggaaggaacaaaaggaggatggaaggattttttgaatacttatgac
agaaagcttggtgcttctttgagtgatccctctaggaggtccaatgatgtcttagtatca
ttcctcaagacatttgcaaaagatgatgatttgaagctttttgatagagtgttgcaaagt
cattcaaataggaacatagtggagcaatttagaaaacaatctcaggataatgaatcccct
gagcagaggcttgttcgtttaactctggaacacccacaatatccactagattatatgttc
ccgacaggtgatgaggaatggatcgttacccagccccctaaaaaatcccggatgatgaaa
tcaaattcaatggttgctgttgattgtgaaatggttctttgtgaagatggcactgaagca
ttagtgagagtttgtgttgtagatcgtgatttacaggtcaaaattgatgaacttgtaaaa
ccaaacaaagcagtggctgattatcgtactgagattactggagttgctgcaggagacttg
gatggtgttacttgttcagtggtagacatacagaaatccatgaagaagctgttatccaat
ggaactattttagtgggacatggtttacaaaatgatttgcaagtgttgaagatagaccat
gcaagagtgattgacacctcatatatcttcaaatatttggatgcacctatctatagaaaa
ccatctttgaataacttgtgcaagtctctactgggatatgaagttcgaaagccaggtgct
gcccataattgtctagatgatgcatgtgctgcaatgaaactagttcttgctaagctagag
cgtggtgacattccactggttcaagaagatgtaactcaaccagaaatggagaagctgcta
ctccacagaataccgatcaatgttcataaagaagaaatatccagagtcattcctggagct
gttgcaattgaagaaaagccatctaaaaaggttcaaggtcgccattactctgcgtttgca
gtctttaatagtcctcaagaagcaaaccaagcatttgaaaatgtggacggtaatgaagaa
aaggattcatccggactacctcagaaactagttagatttctgtttggcaagggagtaact
gctagtttatacatccgaaaaatggcacaggatgattttcaccatcaacttttatcaaat
aaaagagccttccagggtgaggagaaatctagcgagtccaaaaagcttaagacagatcag
aaaattgtggagacaagggaaaattccaatcaacttgatgatcacttaaatgagattgag
cgattgaagcaagaactgaatgagaaatatgctcgaattgtttggctggagaaatctatt
gaatccgacaaggttaagacagatcagaaaactgtggaggtgacaacggcaacttccaat
caacttgatggtcacttaaaagagattgaaaggttgaagcaagaactgaaagagaaagat
tctcgaattgttttgcaggataagatgatatctaaccttctaaagaaggttgatgaaatg
aaaaaggttcctaaaaaaaccaaataa
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