Durio zibethinus (durian): 111294585
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Entry
111294585 CDS
T05242
Name
(RefSeq) exosome complex component RRP45A-like
KO
K03678
exosome complex component RRP45
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111294585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111294585
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111294585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111294585
NCBI-ProteinID:
XP_022743715
UniProt:
A0A6P5YU07
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MDARLANTWRLTVNEKNFIKTALLSEIRIDGRKPFEFRNFIINFGREDGLTEVQLGQTRV
MAIVTAKLVQPYQDRPNEGTLSIYTEFSPMADPSFEIGRPGESAIELGRIIDRGLRESKA
VDTESLCIIAGKLVWALRIDLHILDNGGNLVDAANIAALAALMTFRRPECSLGGEDGQEV
TIHPPEMREPLPLIVHHLPIAITFGFFIDESIMVIDPTHNEEAVMAGRMIATVNANGDIC
AIQKAGGEGVSQRVIMRCLKLATTKAVDITKQIKEAVEAYNSERALQKIKCKSTYAGTNE
ENRNQSVDSKGISELAGKYMERLKLVSRECCVSPNNNEVETKSLRSGTDGINFTSGPLSW
DPYSKGVDPEFLKVSLASQGLSTPNKKKESSGEEKPSGTEREGPYDDVNPKSSAINTSRI
EIQTKGQKTLKDAVKPKNKRKKKGSSII
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggatgctagattggccaacacgtggcgtttgacagtgaatgagaagaattttatcaaa
acagctttgctttctgaaataagaatagatggtcgaaaaccctttgaatttcgtaatttc
atcatcaattttggcagagaagatgggttgacagaggtgcagctgggccagactcgtgtt
atggccattgtgacggctaaattggttcagccttatcaagaccggcccaatgaaggaaca
ctttcgatctacacggagttttcgccaatggctgatccctcatttgagataggccgccca
ggagaatctgctattgagttgggacgtataatagatcgtggtctaagggaaagtaaggcc
gtagatactgaatcactttgtatcattgctggcaagttagtatgggccctccgtattgat
ctccacattctagataatgggggaaacctggttgatgcagctaatatagctgctttggct
gctcttatgacctttcggaggcctgaatgctcactaggaggagaagatggtcaagaagta
acaatacatcctcctgagatgagggagccacttcctttgatagtacatcatcttcccata
gcaattacctttggattttttattgatgagagcattatggtgatagatcccacccacaat
gaggaggctgttatggctggaagaatgattgctactgttaacgcaaatggtgatatttgt
gcgattcagaaagctggaggagaaggtgtcagtcagagggttatcatgcgatgtttgaaa
cttgctactacaaaggctgtggatataaccaagcagataaaagaagcagttgaagcatac
aactcagaaagagctttgcagaagatcaaatgcaagtctacttatgctggtactaatgaa
gagaaccgaaaccaatctgttgatagtaagggcattagtgagttggcaggtaaatatatg
gagagattgaaacttgtatcaagggaatgctgtgtaagtccaaataataatgaagttgaa
accaaatcattgagaagtgggacagatggtatcaattttactagcggccccttgagttgg
gatccttactcaaagggtgttgatccagaatttctgaaagtttcactagcttcacaaggt
ttgtcaactcccaataagaaaaaggagtcaagtggtgaggaaaagcctagtggaaccgaa
cgagaggggccatatgatgatgttaatccaaagtcgtcagccattaatacatctagaatt
gaaatccagacaaaagggcagaaaacattgaaagacgctgtaaaacctaagaacaagagg
aaaaagaagggttcctccattatttaa
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