Durio zibethinus (durian): 111295717
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Entry
111295717 CDS
T05242
Name
(RefSeq) spliceosome-associated protein 130 A isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111295717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111295717
03041 Spliceosome [BR:
dzi03041
]
111295717
03036 Chromosome and associated proteins [BR:
dzi03036
]
111295717
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111295717
Spliceosome [BR:
dzi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111295717
Complex B
111295717
Complex C
U2 SnRNP specific factors
111295717
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
111295717
TFTC complex
111295717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_EML_2
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
111295717
NCBI-ProteinID:
XP_022745092
UniProt:
A0A6P5YXR3
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MYLYHLTLQQATGIVSAINGNFSGGKIQEIVVARGKILSLLRPDDLGKLQTLHSVEIFGC
IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNIFDKVHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGVDCGFDNPI
FAAIELDYSEADQDSTGQAAGEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPEERGVLIVSAATHKQKSMFFFLLQ
TEYGDIFKVTLEHGNDGVTELKIKYFDTIPVTASMCVLKTGFLFAASEFGNHALYQFQAI
GDEPDVESSSSTLMETEEGFQPVFFQPRGLKNLVRIDQAESLMPIMDMKIANLFEEETPQ
IFTLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDAFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNGLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVKASVGGEDGADHPASLFL
NTGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSVKVRGRPAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETAIPLRYTP
RKFVLQPKRKLLVIIESDQGSFMAEEREAVRKEFFEAAGMGENGNGNVDQMENGGDDEDK
EDPLCDEQYGYPKAESSKWVSCIRVLDPRTATTTCLLELQDNEAAFSVCTVNFHDKEYGT
LLAVGTAKGLQFWPKRSLVSGFIHIYRFLEDGRSLELLHKTQVEGVPLALSQFQGRLLAG
IGPVLRLYDLGKKRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQESFHFCKYRRDENQLY
IFADDVVPRWLTASYHIDFDTMAGADKFGNVYFVRLSQDVSDEIEEDPTGGKIKWEQGRL
NGAPNKVEEIVQFHIGDVVTCLQKSSLIPGGGECVLYGTVMGSLGALLPFVSRDDVDFFS
HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPLDLQRKIADELDRTPG
EILKKLEEVRNKII
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctaccacttaactcttcaacaagccaccggtatcgtctccgccataaatgga
aacttctctggcggcaaaatccaagaaatcgtcgtcgcccgtggcaagatcctttccctt
ctccgccccgacgatctcggtaagctccaaacacttcactctgtcgaaatcttcggctgc
atacgttccctagctcaatttcgcctaacaggtgcccaaaaggactatattgtagtgggg
tccgattcgggtcggatcgttatccttgaatacaataaagaaaagaacatctttgataaa
gttcaccaagaaacttttgggaaatctgggtgtcgccggattgtcccgggtcaatactta
gctattgacccgaaaggaagagctgtaatgatcggtgcttgtgagaaacagaaattagtt
tatgttttaaatagagatactgctgctaggttaaccatttcatcgcctttagaagctcat
aagtcacatacaatagtttactcgatttgtggtgttgattgtggttttgacaacccaatt
ttcgctgccattgagttggattactcagaggccgatcaggattccacgggacaggctgct
ggtgaggcacagaagcatttgacattttatgaactcgatttagggcttaaccatgtgtct
aggaagtggtcagaacaggttgataatggggcgaatatgttggtcacggtgcctggtggt
ggtgatgggcctagtggggttttagtttgtgcggagaattttgttatttataagaatcag
gggcatccggacgttagggcggtgattcccagacgagctgacttgccagaagaacgtggt
gttttgattgtttcggcggctacacataagcagaagtcaatgttcttctttcttttgcag
acagaatatggggatatttttaaggttacgttggagcatggaaatgatggagttacagag
ttgaagattaagtattttgatacaattccagttacggcttcaatgtgtgtgttgaaaact
ggttttctttttgcagcttcggagtttggcaatcatgctttgtatcagtttcaggctata
ggagatgaacctgatgttgagtcttcgtcatctacattgatggaaacagaagaaggtttc
cagccagtgtttttccagcctagagggcttaagaatctagttaggattgaccaagctgag
agcctgatgccaataatggacatgaaaattgctaatctctttgaggaagaaacaccacag
atatttacactttgtggacgtggtcctcgttcatctctgaggatactaaggccaggtttg
gccatcagtgagatggctgtctcacaacttcctggtgtcccaagtgctgtgtggacagtg
aaaaagaatgttaatgatgcctttgatgcatacattgttgtgtcatttgccaatgcgact
cttgtcctttccattggtgaaacagttgaagaagttagtgatagtgggtttctcgatact
actccttctcttgctgtttccttgattggtgatgattcgctgatgcaagttcacccaaat
ggtattaggcatataagggaagatggacgtattaatgagtggagaactcctgggaaaagg
acaattgttaaagttggctcaaatgggcttcaagtggttattgcattgagtggaggggag
cttatatactttgaggtggatatgactgggcagctgatggaagtggagaagcatgaaatg
tctggagatgtggcttgtctggacattgcccctgttcctgaaggaagacaaaggtcccgt
tttcttgcagttggttcatatgataatacaatacgtatattgtctttggatcctgatgat
tgtatgcagattcttagtgtgcagagtgtgtcttcacctcctgagtctctccttttcctt
gaagttaaggcatcagttggtggggaggatggtgcggatcaccctgccagtcttttcctt
aatactggtctgcaaaatggagttctgttccgtacagtagtggatatggttacagggcaa
ctctctgattcccgttcacgattcttagggctgagagccccaaagttgttctctgttaaa
gtgagaggccgacctgcaatgctttgcttgtctagtcgaccatggcttggttatattcac
caagggcattttctgctaacacctctttcttacgagacacttgaatttgctgcctcattt
tcatctgatcagtgtgctgaaggtgtcgttgctgttgctggggatgcattgagggttttc
accattgagcgtcttggagaaacctttaatgagactgccattcctttgaggtatactcct
aggaaatttgttctgcaaccaaagcggaaattgttggtaattattgagagtgaccaaggc
tcgtttatggcagaagagcgtgaagctgtaagaaaggagttttttgaggctgccggaatg
ggagaaaatggtaatggtaatgtggaccaaatggaaaatggtggtgatgatgaggacaaa
gaggatcccctctgtgatgagcagtatggttatccaaaagcagagtcgagcaagtgggtt
tcttgcattagagttcttgatccaaggacagctaccacaacttgtcttttggagcttcag
gacaatgaagctgctttcagtgtgtgcactgtgaatttccatgataaagagtatggaact
ctcttggctgtcggcacagccaagggtctgcagttttggcccaaaagaagcttagtttct
ggattcattcatatttataggtttctagaagatggaagatcacttgaactcttgcacaaa
acacaagttgaaggtgttcctcttgctttatcccagtttcagggaagattacttgctggg
ataggacctgtgctccgattatatgacttagggaagaagagactgcttaggaaatgtgag
aataagcttttccctaacactattgtctctatccaaacttatcgtgatcgaatatatgtt
ggggacatccaagagtcattccatttttgcaagtatagaagggatgaaaatcaactgtat
atatttgccgatgatgttgttccaagatggcttactgcatcataccatatagattttgac
accatggctggtgcagacaagtttgggaatgtctattttgtgcggctatcgcaagatgta
tcagatgagatagaagaagacccaactggtggaaagataaaatgggaacaagggaggctc
aatggagctcctaacaaggtagaggagatagttcagttccatattggagatgtggtaact
tgcttgcagaagtcatctctgataccaggtggaggagagtgtgttctttatggaacagtg
atggggagcttgggggcattgcttccttttgtttcccgtgatgatgttgacttcttttct
cacctagagatgcatatgagacaggaacaccctcccttatgtggacgagatcatatggct
tatagatctgcttatttccctgtcaaggatgtgattgatggggatttgtgtgagcagttt
cctaccctacctttggatttgcaaagaaaaattgcagacgagttggatcgtactcctggg
gagatactgaagaaacttgaagaggtccgaaacaagattatttga
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integrated database retrieval system
