Durio zibethinus (durian): 111295870
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Entry
111295870 CDS
T05242
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
dzi
Durio zibethinus (durian)
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111295870
03036 Chromosome and associated proteins [BR:
dzi03036
]
111295870
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111295870
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111295870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
HTH_44
HHH_9
Tex_central_region
HHH_3
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
111295870
NCBI-ProteinID:
XP_022745380
UniProt:
A0A6P5YYP2
LinkDB
All DBs
Position
Unknown
AA seq
1609 aa
AA seq
DB search
MGKNVVSDEEDELEVDEEGQPIEGDTLNDRDPDDDDEEDEGQDEYENDGFIVDDVEDEEV
DEDEEREDSDEERRKKKKKRKKKEAEDLDEDDYELLRENDVNVPKGSKKFKRLKKAQRDL
DEERFGLSDDEFDGSMKGGTTAEEKLKRTLFGDDDGPPLEDIPEDEDQIEEEEDGDMGEE
DEMADFIVDEEYEHGTSVRRKKMKNKKSRQASGASQSALKEAQDIFGDVDELLLLRKQGL
DSNEWKERRLEDQFEPAVLSEKYMTEKDDQIRVNDIPERMQVSEESTGTPPADEMSIIEE
STWIHNQLISGAVPLFGKERQNLSINKDDIMRFLDLTHVQKLDIPFIAMYRKEMCLSLLK
DPEQHEVDDVDQDNSDKTSTIKWHRVLWAIQNLDRKWLLLQKRKTGLQSHYNKRFEEESR
RVYDETRLNLNQRLFESILKDLKDAESEREVDDVDAKFNLHFPPGEAGVDEGQYKRPKRR
SQYSICNKAGLWEVASKFGYSAQQLGSQLSLEKLGDELEDAKETPEVMASNFTCAMFETP
QAVLKGARHMAAVEISCEPSVKKYVRGFYIENAVVSTSPTPDGKIAIDSFHQFAGVKWLR
EKPLGRFEDAQWLLIQKAEEEKLLQVTVKLPEKCLNDLIKECDDLYLSNGVSKSAQQWNE
QRKLILSDAFFGFLLPSMEKEARSLLASGAKNWLLLEYGKGLWNKVSVGPYQRKENDINS
DEEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTDSLTLRSQNVNDQQRKKNDQQRV
LKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDELSIVYGDESLP
RLYENSRISSDQLPGQSGIVKRAVALGRYLQNPLAMVATLCGPGKEILSWRLSPLENFLT
TDEKYGMVEQVLVDVTNQVGLDVNLAISHEWLFAPLQFISGLGPRKAASLQRSLVRVGTI
FTRKDLLTTHGLGKKVFVNAVGFLRVRRSGLAANSSQFIDMLDDTRIHPESYLIAQELAK
DVYDEDFKGDIDEEDALEMAIEHVRDRPSLLKSLRLDNYLESKKRENKRETFYDIRRELI
QGFQDWRKQYKEPSQDEEFFMISGETEDTLAEGRIVQATVRRVQGGRAICVLESGLTGMI
MKEDYADDSRDIVELSDRLHEGDILTCKIKSIQKNRYQVFLVCKDSEMRSNRYQHVQNLD
PYYHEEQSSLQSEQEKARKEKELAKKHFKPRMIVHPRFQNITADEAMEYLSDKDPGESII
RPSSRGPSYLTLTLKVYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVM
DRYVDPLVSHLKAMLSYRKFRQGTKTEIDELLRIEKSEYPMRIVYCFGISHEHPGTFILT
YIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQNESAPSIRSVAAMVPM
RSPAAGGSAGASMGSGWGGSNNEGGWRGQSFDRGQSSTPGSRTGRNDYRNSSSRDGHPSG
VPRPYGGRGRGRGSYNSSRGHNEGQDSSYDNDTPKWDSGTKKGDDGWGNFPGAKVQNSPG
KEAFPGGWGAGGTESGSGTGSGWGQASGGTDNGGSGWGSVPKGSSSGGW
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaacgtcgtttctgatgaagaagatgagttggaggtcgacgaggaaggacag
cccattgagggagacacactcaatgaccgcgaccctgatgacgacgatgaagaagacgaa
gggcaagatgagtatgagaatgacggattcatagttgatgatgtggaagatgaagaagta
gatgaagatgaagagagggaagatagcgatgaggagaggcgaaagaagaagaaaaaaaga
aaaaagaaggaagctgaggaccttgacgaagatgactatgagctcctccgggaaaatgat
gttaatgtaccaaagggtagcaagaaatttaagcggttaaaaaaagctcaaagagattta
gatgaggaacgatttgggctgtctgatgatgagtttgatggaagcatgaagggtgggaca
actgctgaggaaaagcttaagcgtaccttatttggtgatgatgatggaccacctcttgaa
gatattcctgaagatgaagaccaaatagaggaggaagaagatggagatatgggcgaagaa
gatgaaatggcagactttattgtagacgaagaatatgagcatggaacttccgttagacgg
aagaagatgaagaataagaagtcaaggcaggcatcaggagcttcgcaatctgctttaaaa
gaagctcaagatatatttggtgatgttgatgaactccttctgctacgcaaacagggctta
gattctaatgaatggaaagaaaggagacttgaagatcaatttgaacccgctgttctttct
gaaaagtatatgacagaaaaggatgaccaaattcgggtgaatgatattccagaaagaatg
caggtttctgaagaaagcactggcactcctccagcagatgaaatgagcataatagaagag
agcacctggatacacaaccaacttataagtggtgctgtacctttatttggtaaagaaagg
cagaatctttctataaacaaggatgacatcatgaggtttttggatctaacacatgtgcag
aagttagatattccctttattgcgatgtatcgcaaggagatgtgcctaagtctgctaaaa
gatcctgagcaacatgaggttgatgatgttgatcaggataattctgacaaaacatctaca
ataaagtggcacagggtactttgggcaattcagaacctggaccgaaaatggctacttctt
caaaagagaaagactggtctccagtcacactataataagcgatttgaagaagaatctcgt
cgggtatatgatgagacaagacttaacttgaaccaacggctttttgagtcgattcttaaa
gatctcaaggatgctgagtcagaaagggaagttgatgatgttgatgccaagtttaacttg
catttcccgccaggggaggctggtgtggatgaaggtcaatataagaggcccaagaggaga
tcacaatatagtatttgcaataaggctggcctgtgggaggttgcaagcaagttcggatac
agtgctcagcaactaggatcacagctatctctggaaaagctgggtgatgagttggaagat
gctaaggagacaccggaagtgatggcttcaaactttacttgtgcaatgtttgagactcca
caagctgtccttaaaggagccagacatatggctgcggttgagataagttgtgagccatct
gtcaagaaatatgttcgtggtttctatatagagaatgctgtagtatcaaccagtcctact
cctgatggaaaaatagccatagattctttccatcaatttgcaggtgtgaagtggttgcgt
gaaaaaccattgggcagatttgaggatgcacagtggctccttatccagaaggctgaagag
gagaagcttcttcaagtaactgttaagctgccagaaaaatgtctgaatgacttgattaaa
gaatgtgatgacctatatctcagtaatggtgttagtaaatctgcgcaacaatggaatgaa
cagaggaagctgatactgagtgatgctttttttggttttcttttgccatcaatggagaaa
gaagcaagatccttattggctagtggagctaagaactggttacttttggaatatggcaag
ggtttgtggaataaagtttctgttgggccttatcaaaggaaggaaaatgatataaattcc
gatgaggaagctgcacctcgagtaatggcttgctgttggggccctgggaagcctgcaacc
acttttgtgatgctagattcgtctggggaggtgcttgatgtgctttacactgattctctt
acattacggtctcaaaatgtcaatgaccagcaacgcaagaaaaatgatcagcaacgagtt
ttgaagttcatgactgatcatcaaccacatgttgttgttcttggagctgtgaatttgtct
tgtacacgtttgaaggatgatatttatgagattatttttaagatggtggaggaaaatcct
agagatgttgggcatgaaatggatgagctgagcattgtatatggggatgaatctcttccc
cgtctctatgaaaattctaggatttcatcagatcagctacctggccagtcaggcattgtt
aagcgggccgttgcacttgggcgttatcttcaaaatccgttggcaatggttgcaacttta
tgtggaccagggaaggagatattgtcttggaggcttagtcctttggagaactttctcacg
acagatgagaagtatggcatggttgaacaggttttggttgatgtcacaaaccaggtgggc
cttgatgttaatttggctataagtcatgaatggttgtttgcccctttgcaattcatttct
ggtcttgggcctcgaaaggcagcatcattgcaaaggtcattggtaagagttggaacaatt
tttactcggaaggaccttttgacaacccatggacttggtaagaaggtgtttgtcaatgca
gtaggctttttgcgtgtccgtcgcagtgggcttgctgccaacagtagccagttcattgat
atgttggatgacactagaatacatccagaatcttatcttattgctcaagagttggcaaaa
gatgtctatgatgaggattttaaaggtgacattgatgaagaggatgcattggagatggca
atagaacatgttagggaccggcctagtttgttgaaaagtcttcgtcttgataactatcta
gaaagcaagaagcgtgaaaataagagggagaccttttatgatataagaagggaattaatt
cagggctttcaggattggcgtaaacaatataaagaaccaagtcaagatgaggagttcttc
atgatttcaggtgaaactgaggataccctggcagaaggtcgaattgtgcaagctacagtt
cgcagagtgcaaggtggacgagctatctgtgtacttgaatctggattgactggaatgatt
atgaaagaagactatgcagatgattcaagagatattgtggagttgtctgataggctgcat
gaaggtgacatcctgacttgcaagattaaatcaattcaaaagaataggtatcaggttttc
ctggtttgtaaagatagtgagatgagaagcaacagataccagcatgtccagaaccttgat
ccttactaccatgaggagcaaagcagtttacagagtgagcaagagaaagctcgtaaagag
aaggagctggcaaagaagcattttaagccaaggatgattgtccatccacgcttccaaaat
attactgctgatgaagctatggagtatttatctgacaaggatcctggagaaagtattatc
cgtcccagttcgcgtgggccttcttatttaactttaactctcaaagtttatgatggagtt
tacgctcacaaagatatagttgaaggtggaaaagaacacaaggacatcaccagcctgctt
cgcatcgggaagacattgaaaattggggaagacacttttgaggatttggatgaggtaatg
gatcgatatgttgatccccttgtgtctcatctaaaggcaatgctgagttatcgtaagttc
aggcagggaactaaaacagagattgatgagcttctaaggattgagaaatcagagtatcct
atgaggattgtgtattgttttggcatttctcatgaacatccgggcactttcattcttact
tatataaggagtacaaatccacatcatgagtatattggcttatatcccaagggattcaag
ttcagaaaaaggatgtttgaggacattgatcgtctggttgcatatttccagaggcatatt
gatgatccacagaatgagtcagctccatcaattagatcagttgcagcaatggtaccgatg
cggagccctgctgctggaggctctgcaggggcatctatgggtagtggttggggtggttca
aacaatgaaggtggttggagaggccagtcttttgacaggggtcaatcatccactccaggg
tcaagaacaggtagaaatgattacagaaatagcagtagccgagatgggcatccgagtggt
gtaccacggccatatggtgggcgtggacgtggtaggggctcatataacagcagcagagga
cataacgaggggcaggattcatcttatgataatgatactcccaaatgggattcaggtacc
aagaaaggggatgatggttggggtaatttcccgggtgctaaagttcaaaactctccaggt
aaggaagctttccctggtgggtggggcgctggtggaactgaaagtggaagtggaactggc
agtggttggggccaagcaagtggtggtactgacaatggtggttctggctggggatctgtt
cccaagggcagtagttctggtggctggtga
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integrated database retrieval system
