Durio zibethinus (durian): 111295979
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Entry
111295979 CDS
T05242
Name
(RefSeq) uncharacterized protein LOC111295979 isoform X1
KO
K06100
symplekin
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111295979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111295979
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111295979
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111295979
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111295979
U7-dependent histone pre-mRNA processing factors
111295979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT
HEAT_2
Motif
Other DBs
NCBI-GeneID:
111295979
NCBI-ProteinID:
XP_022745641
UniProt:
A0A6P5YZY1
LinkDB
All DBs
Position
Unknown
AA seq
1362 aa
AA seq
DB search
MVNPVSREMLSRLSNSVNLAIDLASKLDLCRQLKQDLLKEDAAALSEFLPRLFDLYSDPS
GPVRKFATEIIGEIGVKHLEFVTEIAPFLITVLEDATPAVARQSIACSIDLFRHTLEKIA
IQGYNYLQGKLFLFCLHLLLSCVNFSRKGLYSSELDSDLESSWSWMLKLKEKIYSIAFQP
GSGGIRLVALKFVEAVILLYTPDPNGSPEPPSDGGTPIEFNIAWLRGGHPLLNVGDLSIE
ASQRLILLLDQLRFPTVKSLTSSVIVVLINSLSAIAKKRPAYYGRILPVLLSLDPPSYVI
KGVHVYGAHHALKNALLSCLKCTHPSAAPWRDRLLGALREMKGGGLAELALNQAHKINGS
VEEEKDDSSVIKEEKPLIKACDVVGTNVGRKRSGTEDNSDLAENDDVSGKRVRSTPSVSE
ESTKELNRNTTMSQGDIFSTQPTTNKGDVDTGPVQQLVAMFGALVAQGEQAVGSLGILIS
SISADLLADLVMANMGNLPPSHPHTDGDDELLENMCIVGSDTQAKYPPSFLADVVSLSST
FPPIASLLNSRQSVSNKIVIQKTEGEEEVDVVAGPNNAVAHAGMAHEAENALLAADLPVS
SDIVLPGMEKIDLPTPSDIQDVGNLESEIPGLDSSVHNDGLSDTQAASSLVSTDLEDASQ
DQVTSFGGRSLLHVLPSISTDRSEELSPKAVVTDSNSMISSTATSVVSSYCFVLPKMSAP
VVNLSDDQKDDLQKLAFIRIIEAYKQIAVAGGSQVRFSLLAYMGVELPSELDLQKLLQEH
ILSDYINHEGHELTLRVLYRLFGEAEEESDFFSCTTAASAYETFLLAVAETLRDSFPPSD
KSLSRLLGEAPRLPKSVLNLLEGLCSPGISEKTEKESLSGDRVTQGLSTVWSLILLRPPI
RDVCLKIALQSAVHHLEEVRMKAIRLVANKLYPLSSIAQQIEDFAREMVLSVVNADGTER
TDAEGLITESRKDSDSEKPSNEHQSMSSISKDISDDVHQSETSQSVSSLSVPEAQRCMSL
YFALCTKKHSLFCQIFLIYSSASKAVKQAIHRHIPILVRTMGSSSDLLEIISDPPSGSKN
LLMQVLHTLTEGTVPSAELIFTIKKLFDSKLKDVEILVPVLPFLPRDEVLLLFPYLVNLL
PDKFQAALTHLLQGSSHSGPVLSPAEVLIAIHGIDPERDGIPLKKVTDACNACFEQRQIF
TQQVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPALVEFIMEILSRLVSKQIWKYPKLWV
GFLKCALLTKPQSFSVLLQLPPPQLENALNRTAALKAPLVAYASQQNIRASLPRSVLAVL
GLAPDSQSSSQVQTSQALHTGDTSNSEKDAVAEKSKESSSAS
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatccagtttcgagggaaatgctttcaaggttatccaactcagtgaatctagct
attgacttagcttcaaagctcgacctctgtcgtcaattgaagcaagacttattgaaggaa
gacgctgctgctctgtccgagttccttcctcgactcttcgacctttactctgacccgtcc
ggtccggttcgcaaatttgctactgagattattggtgaaattggtgtgaagcaccttgaa
ttcgtaactgaaattgcaccgtttctgataactgttttggaagatgctacacctgctgtt
gctcgacaatctattgcttgcagtattgatttgtttcgccatacgctggaaaaaattgca
attcagggatacaattatttacaaggaaaactgtttttgttttgtctccacttgctgtta
agttgtgttaattttagccgtaagggtctatactccagtgagttggacagtgatcttgaa
tcatcgtggtcatggatgttaaagttaaaggagaagatatactctatagcttttcagcca
ggaagtggtgggataagattggtggctctgaagtttgttgaagcagttattcttctttat
actcctgatcctaatggttctccagagcccccttctgatggaggaacccctatagaattt
aacatagcttggcttcgtgggggccatcctttactcaatgttggggatttgtcgattgaa
gctagccaacgtttgattttgttgcttgatcagcttagatttccaacagtaaaatcgctc
accagctcggtcattgttgtgcttattaacagtctttcagcaattgcaaagaaacggcct
gcatattatggacgtattctaccagttttgcttagtttggatcccccaagctatgttatc
aaaggggttcatgtgtatggagcacatcatgctttgaaaaatgccttactctcctgcttg
aaatgtacacacccaagtgctgcaccgtggagggatcgtttacttggtgccttgagagag
atgaaaggtggaggactggcagagctagctctaaaccaagctcataaaattaatggaagt
gtggaagaggaaaaagatgattcttcagtcataaaggaagaaaaacccttgattaaagca
tgtgatgttgttggtaccaatgtgggaaggaaaagatctggaactgaggacaatagtgat
ttggctgaaaatgatgatgtgtctggaaaacgtgtcaggtcaacacctagtgtctcagaa
gagtcaacaaaagagttaaacaggaatactactatgtctcagggtgacattttttcaact
caacctaccacaaacaaaggagatgttgatactggaccagtccagcaacttgttgccatg
tttggagccttggttgctcaaggagaacaagctgtgggatctttggggattcttatttca
agcatatctgctgacttgctggctgatttagtgatggctaacatgggtaaccttcctccc
agtcatcctcacactgatggagatgatgaattgctggagaacatgtgcatagttggaagt
gacactcaagccaagtatccaccatcatttttagctgatgttgtttcactgtcgagtact
ttcccgccaatagcctcattacttaattctcggcaatcagtttccaataaaatagtgata
cagaaaacagaaggggaggaagaagttgatgttgtggctggcccaaataatgctgttgca
catgctggcatggctcatgaggctgaaaatgctttgttggctgctgatttaccagtttct
tctgacattgttttgcctggaatggagaagattgatctacctactccgtctgatatccaa
gatgtggggaatcttgaaagtgagatacctggtttggattcttctgttcataatgatgga
ttgtcagatacccaggcagcttcctcgttggtctctactgatctagaagatgctagtcaa
gaccaagttacaagttttggtggaaggtcactgctgcatgtgcttccatcaatttcaaca
gataggtctgaggagcttagtccaaaagcagttgttaccgattccaacagcatgatttcc
tcaacagcaacttccgttgtttcatcctattgctttgtcttgcccaagatgtcagcacct
gttgttaatctttctgatgatcagaaggatgatttgcaaaagttggcttttatacgtatc
attgaggcatacaagcaaatagcagtagctggaggttctcaagttcgcttttctctgctt
gcttatatgggagttgagttgccatcagagttagacctacagaaacttctacaagaacac
attttgtcagattatataaatcatgagggacacgagttgacattgcgtgtcctctacagg
ttatttggagaggcagaagaggaaagtgatttcttctcatgtacaactgctgcttccgca
tatgaaacattccttctggctgtagctgaaactcttagggactcttttccaccttctgac
aaatctttaagtagactacttggtgaagctcctcgcctgccaaaatcggttttgaattta
ttagagggtttgtgctctcctggaatctcagagaaaactgagaaggagtcactaagtgga
gatagagttactcaaggcctcagcaccgtatggagtctaattctattgagaccccccatt
cgagatgtgtgcttgaaaattgctttgcagagtgctgttcatcacttggaggaagttcga
atgaaagcaatacgtctggtagctaataagctttaccctctatcatccattgctcaacaa
atagaagattttgccagggaaatggtgctctctgtagtaaatgctgatggtacagaaaga
acagatgctgaaggattaatcactgaatcacgtaaggattctgattcagaaaagccgtca
aatgagcatcagtcaatgagttccattagtaaagacatctctgatgatgttcatcagtca
gaaacatctcagagtgtgtcatccctttctgtccctgaggcacagcggtgcatgtctctg
tattttgctctgtgtacaaagaagcactctcttttttgccaaatatttcttatctacagt
agtgcatcaaaggcagttaagcaggcaatccatcgtcatattcccatactagttcgtacc
atgggctcgtcatctgaccttcttgaaattatttcagatcctcctagtggaagcaagaat
cttctgatgcaggtattgcatacactgactgaggggacggttccttcagcagaattgata
tttaccattaagaagttatttgattcaaaattaaaggatgttgaaattctagttccagta
ttgccattcctaccaagagatgaggttttgctgctctttccgtatcttgtaaatcttctg
ccagataagttccaagctgcacttacccatttgctacagggatcttctcattctggtcca
gtgctctctccagctgaagtgttaattgctatccatggcattgatcccgaaagagatgga
attcccttgaagaaggtcacagatgcatgtaatgcttgttttgagcaacggcagatattc
acccagcaagttctagcgaaggtcttaaatcagttggttgagcagattcctcttcctttg
ttgtttatgcgtactgtattacaagccattggtgcttttcctgcattggtggaatttata
atggagattctttctcgtcttgtaagcaagcagatatggaaatacccaaagttgtgggta
ggatttttgaaatgtgcactcttgacaaagcctcaatctttcagcgtgttgcttcagcta
cctcctccacagctggaaaatgcactgaatagaactgcagcgctcaaagctcctttggtt
gcttatgctagccaacagaatatacgagcttcacttccaaggtctgtattggcagttttg
ggacttgctccggattctcagtcttccagtcaggtacaaacaagtcaggctcttcacact
ggagatacaagcaattcagagaaagatgcagtggcagagaaatctaaggaatcatctagt
gctagctga
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