Durio zibethinus (durian): 111295999
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Entry
111295999 CDS
T05242
Name
(RefSeq) general negative regulator of transcription subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111295999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111295999
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111295999
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111295999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
111295999
NCBI-ProteinID:
XP_022745692
UniProt:
A0A6P5YZH7
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Position
Unknown
AA seq
891 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKQIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDSFEAEIEGLSVKKGKTRPPRLTHLETSITRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDDFSDVDELYSSLPLDKVES
LEDLVAIGPLSKGVPILGLKTSLASSGSQTPQGSSSQEHVEDTASQDSNSDIARTPPSKS
SAINSSSAVTPSGNHANPAPVNLPPHSLSGASTPSVVLPVSNSARGVLENSGTTNPSSPV
NLPDATKEEDITSFPGRRPSPSLADTGVRGIGRVGLSSQPSSSIPLVSGSVASSSGALGV
VPSVSDMTKINILGPDERLGNSSMGQSLVSPLSNRMILSQAAKANDGIASVDSSNPNESA
GLPGRAFSPSMVSGVQWRPGSSFHNQNELGQFRGRTEIAPDIREKFLQRLQQVQQQGHSN
LLSMPSLAGGNHKQFSAQQQNPLMQQFNSQSSSLSIQPGLGLGGQAQSLNSVASASLQQQ
PNSIQQQSSQQALAISVPKDADVGHAKVEEQQPQNLPDDSSSEAVSTSGIAKNLMNEDDM
KTPYAIDSPAAVSGSLTEPAQVIRDIDLSPGQPLQTNQSSSGLGVIGRRSISDLGAIGDN
LSGSTNSGGMHDQIYNLQMLQAAYYKIPQPKDSERARTYTPKHPAATTPASYPQVQAPIV
NNPAFWERLSIDGYGTGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHE
EPKIATDEFEQGTYVYFDFHIANDDHQHGWCQRIKTEFTFEYNYLEDELMV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagtcgcaagcttcaaggagagatcgatcgggttctgaagaaggtccaagaa
ggcgtcgatgtctttgatagcatctggaacaaggtttatgatactgataatgcgaatcag
aaggaaaagtttgaggcggacttgaagaaggaaatcaagaagctccaaaggtatagggac
cagatcaagacatggatccaatcgagcgagatcaaggataagaaagttagtgcttcttat
gaacaagccctggtggatgctcgcaaacaaattgagcgtgagatggaaagatttaagatc
tgtgagaaggagactaagacaaaagcattctctaaagaaggcttagggcaacaacccaaa
actgatccaaaggagaaggctaaatctgagacaagggattggttgaataatgtggtcgga
gagttagaatcccaaattgatagttttgaagctgagattgaggggctgtctgtgaagaaa
ggaaagacgagaccacctagactgacacacttggagacatcaattacacggcacaaagct
catataatgaagttagaattgattttgagactattggacaatgatgaattgagtccagag
caggtcaacgatgtgaaagatttcttggacgattatgtggaacgtaatcaggaggacttc
gatgactttagtgatgtcgatgagctctacagctcattacctttagacaaggtggagtct
cttgaagatttagttgcaattggccctctttccaagggtgttccaattcttggcttgaag
acatctttggcatcatcaggatctcaaacgcctcagggtagttcctcccaggagcatgtt
gaagatacagcttcccaggatagcaattctgatatagcaaggactccgccttcaaaaagt
agtgcaattaattcttcttctgcagtaacacccagtgggaaccatgcaaaccctgctcca
gtgaatcttccacctcatagtttgtcaggtgcttcaacaccttcagttgttcttccagtt
tcaaattctgctcgaggtgtcttggaaaactcaggcactaccaatccttcttctcctgta
aatttgccagatgctacaaaagaagaagatatcacaagcttccctggccgtaggccatct
ccatctcttgctgatactggagtgcgaggcattggtagagtaggcctttccagtcagcct
tcatctagtattccacttgtttctggaagtgtggcttctagcagtggagcccttggtgtt
gtcccttcagtctctgacatgacaaaaataaatattttggggcctgatgagagacttggg
aatagtagcatggggcaatctttggtatcccctctgagtaacagaatgatcttgtctcag
gctgcaaaggctaatgatggaattgcatctgttgattctagtaatcctaatgagtctgct
ggactacctggcagagctttttccccttcaatggtttctggtgtgcagtggaggcctgga
agttccttccacaatcaaaatgagctggggcagtttcgtggaagaactgagatagcgcct
gatataagggaaaaatttttgcaacggctccagcaagtgcaacaacaaggccatagcaat
ctgcttagcatgccttctcttgctggaggaaatcataagcagttttctgcacaacaacaa
aaccctctcatgcagcagttcaattctcaaagctcatctctctctatccaacctggactg
ggtcttggtggccaagcacaaagtctcaatagtgttgcatctgccagcttacagcagcaa
ccaaattccatccagcagcagtctagtcagcaggcattggcaataagtgttccaaaggat
gctgatgttggccatgcaaaagttgaggaacaacaaccacagaatttaccagatgactca
agttctgaagctgtttcaacttctgggattgccaagaatctcatgaatgaggatgatatg
aaaactccttatgctattgattctcctgctgctgtatcaggctctttgactgaacctgct
caagttattagggatattgatctttctcctgggcaacccttacaaaccaaccagtcttct
agtggtcttggtgttattggccggagaagcatttctgatcttggtgccattggtgacaac
ctcagtggatcaacgaattccggaggaatgcatgatcaaatatacaatttgcagatgctt
caggcggcatattataaaattccccaacctaaagactcagaacgtgcaaggacctacact
ccaaagcaccccgcagccaccacacctgctagctaccctcaagttcaggcacccatcgtg
aataatcctgccttttgggaacgcttaagcatcgatggatatggcactggcacagataca
ctgttctttgcattttattatcaacagaacacttaccaacaatatctggctgcaaaggag
ctgaagaagcaatcttggagataccacagaaaatacaacacatggtttcagcggcatgag
gagccaaaaattgccaccgatgaatttgaacagggaacctatgtatatttcgattttcac
atagcaaatgatgaccaccaacatggatggtgtcagagaatcaagactgagttcaccttt
gagtataactatcttgaagatgaacttatggtatga
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