Durio zibethinus (durian): 111296484
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Entry
111296484 CDS
T05242
Name
(RefSeq) regulator of nonsense transcripts UPF2-like isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03013
Nucleocytoplasmic transport
dzi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111296484
03015 mRNA surveillance pathway
111296484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111296484
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111296484
mRNA cycle factors
P-body specific factors
111296484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
SR-25
Dict-STAT-coil
Motif
Other DBs
NCBI-GeneID:
111296484
NCBI-ProteinID:
XP_022746546
UniProt:
A0A6P5Z2K9
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MDHHEDECRAGGEHHGKQDDEEAVARLEEIKKIIEGKMTLRQTNLNPERPDSGFLRTLDS
SIKRNTAVIKKLKQINEEQKEGLMEELRSVNLSKFVSEAVAAICDAKLKSSDIQAAVQIC
SLLHQRYKDFSPSLIQGLLKVFFPGKSGDDLDADRNLKAMKKRSTLKLLLELYFVGVIED
NGIFINIIKDLTSTEHLKDRDATQTNLTLLASFARQGRVFLGLPVSGQEIQDEFFKGLNI
TADQKKTLRKAFHAYYDAVSELLQSEHESLSQMEHENAKILNAKGELNEENASLYERLRK
SYDHLYRNVSSLAEALDMQPPVMPEDSHTTRVTTGEDASSLATGKESLNLEAIWDDEDTR
AFYECLPDLRAFVPAVLLGEAEPKVIEQTSKAQEQPTESSTEADQSTSVAQEAVEASADS
GNLQEGKSIEKGKDKEEKDKEKTKDPDKEKGKEKEKDTDKKVENEKEKLKGLEGTNLDAL
LQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTC
MKDVPSVLLQMLEEEFNFLTNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFGCLKTCL
DDFTHHNIDVACNLLEMCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLVENAY
YLCKPPERSARVSKVRPPLHQYIRKLLFTDLDKSSIEHVLRQLRKLPWSVCESYLLKCFM
KVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRIAHMRF
LGELYNYEHVDSSVIFETLYLIIVFGHDTAEQDVLDPPEDCFRIRMVITLLQTCGHYFDR
GSSKRKLDRFLIHFQRYILSKGALPLDIEFDLQDLFAELRPNMIRYSSIDEVNAALVDLE
EHEHSASTDKTSSDKHSDTEKPSSRTTANSVSADRSSILNGSEENGAVHEEIGDSDSESG
SGTIELEGHDEDDLDEENHDDGSDTDEEEEDDGGAASDEDDEVHVRQKVAGLDPQEVSNF
DQELKAVVQESMEQRKLELRGRPTLNMMIPMNVFEGSTKDYHGRVVGVESGDEALDEEAG
GSRSVQVKVLVKRGNKQQTKQMYIPRDCTLVQSTKQKEAAEFEEKRDIKRLVLEYNDRVE
EENNGLGTQTLNWPSGNSKAYGRGHSWEGSSGRSGVPRHRHHSHSGSGAYYSRKK
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcatgaggatgaatgtcgggctggaggtgaacaccatggcaagcaagatgat
gaggaagccgttgctcgtcttgaggaaattaagaaaataattgagggcaagatgactctt
cgtcaaaccaatttgaatcctgaaagacccgactctgggttcctcaggacgttggattcc
agcattaagcgtaatacagctgttattaaaaaattaaagcagataaatgaagagcagaag
gaaggattaatggaggagctacgaagtgtcaatttaagtaaatttgtgagtgaagctgtg
gctgctatttgtgatgccaagcttaagagttcagatatacaagctgcggttcagatctgc
tctttgcttcatcaaaggtacaaagatttctcaccaagtctgatacaagggctcctgaaa
gtcttctttcctggaaaatctggggatgatttggatgcagacaggaacttgaaggcaatg
aaaaagcgtagcactttgaaacttcttctggaactttactttgttggagttatagaagac
aatggaatctttatcaatatcattaaggatcttaccagcacagagcacttgaaggaccga
gatgctactcagacaaatttgactcttcttgctagttttgctcgacaagggcgagtattt
ctagggcttccagtttctggtcaagaaattcaagacgagttctttaagggccttaatatc
acagctgatcaaaagaaaaccttgaggaaggcatttcatgcatattatgatgctgtctct
gaacttcttcagtctgagcatgagtcacttagtcaaatggagcatgagaatgccaagatt
ctaaatgctaaaggagagcttaatgaagaaaatgcgtctttgtatgaaaggctgcgaaaa
tcttatgatcatttgtaccgcaacgtctcatctttagcagaagcacttgatatgcagcct
ccagtcatgcctgaggacagtcatacaactagggttactaccggagaggatgcctcatct
ctagcaactggaaaagagtctttgaaccttgaagctatatgggatgatgaagacactaga
gctttctatgaatgcttaccagatctcagggcatttgtcccagcagtcttgttgggagaa
gcagagcccaaagtgattgaacaaacatcaaaggcacaagagcaaccaactgaatcctct
actgaagcagatcaaagtacatcggttgcccaagaagctgtggaggcttctgcagactct
ggcaatctgcaagaaggaaaaagtatagagaaagggaaggataaagaagaaaaggacaag
gaaaagaccaaagatccagacaaggagaaagggaaagagaaagaaaaagatactgataaa
aaagtagaaaacgaaaaggagaagctcaaaggtcttgaagggacaaatttggatgctcta
ctgcaaagactcccaggttgtgtaagccgtgaccttattgatcaactgacggttgagttc
tgttatttgaattcaaaatcaaatcggaagaggcttgtgagagcattgtttaatgtccca
aggacgtctttggagttgctgccatactactcacgcatggttgcgacattgtcaacttgt
atgaaagacgttccatctgtgctcttgcagatgttggaggaagagttcaacttcttaact
aataaaaaggatcaaatgaacattgaaaccaagatcaggaatatcaggtttattggagaa
ctctgcaagttcaaaattgcaccagctggccttgtcttcggttgtctgaagacatgttta
gatgatttcactcatcataacattgatgtcgcttgcaatcttcttgagatgtgtggtcgt
tttctatatcgttctcctgaaactaccataagaatggctaacatgttggagatattgatg
cgcctgaaaaatgtaaaaaatttggatcctcgacatagcacacttgtagaaaatgcttac
tacctatgcaaaccacctgaaagatctgcacgggtctctaaagtccgtcctccattgcac
caatatattagaaaattgctatttacagatctagataagtcttccattgagcatgtgctg
aggcaacttcgtaaattaccatggagtgtatgtgaatcatacctcttaaagtgcttcatg
aaggttcacaaggggaaatatggtcagattcacttgattgcttctctcactgctggtttg
agtcgctatcatgatgaatttgctgttgctgttgtcgatgaggttttggaggagattagg
cttggcctggaattgaatgattatgggatgcagcagagacgcattgctcatatgcgtttt
cttggggagctatacaactatgagcatgttgattcttctgtcatctttgaaacactctat
ttgattattgtttttggccatgatacagcagagcaagatgtcctcgatccacctgaggat
tgttttcgaatcagaatggttattactcttcttcagacatgtggccactactttgaccga
ggttcctccaagagaaaacttgatcggttcttgatacacttccagaggtatattcttagc
aagggtgccttaccgctggatattgaatttgacttgcaggacttatttgcagagttacgt
cccaacatgattcggtattcatctattgatgaagttaatgcagctttggtagatcttgag
gaacatgaacattctgcttcaactgacaagacaagtagtgacaagcactccgatactgaa
aagccttctagcaggacaactgccaattccgtctcagctgatcgatcaagcattctaaat
ggttctgaggaaaatggtgcagtgcatgaggaaattggtgacagtgacagtgaatcaggg
agtggcaccattgaactagaaggacatgatgaagatgatttggatgaagagaatcatgat
gatggaagtgacactgatgaggaggaagaggatgatggtggagctgcttctgatgaggat
gatgaagttcatgtcaggcagaaggtagcagggttggatcctcaagaagtatccaatttt
gaccaggagctcaaggctgtagtgcaggagagcatggagcagcggaagctggagctacgg
ggccgacctacattaaacatgatgatcccaatgaatgtgtttgagggttctactaaagat
tatcatggaagggtagttggagtggaaagtggtgatgaagcactggatgaagaggccgga
ggaagcagatcggtgcaggtgaaagttcttgtgaagcgagggaacaaacaacagacaaaa
caaatgtatattcctcgtgattgtactcttgtccagagcacaaaacagaaagaagcagct
gagttcgaagagaaacgagacattaagaggctggtcttggagtataatgacagggtagag
gaggagaataatggacttggaacacagacattgaattggccgagtggaaacagcaaagct
tatggccgtggacactcatgggaaggatccagtggcaggagtggtgtaccacgtcatcgg
catcatagccattcaggaagtggagcttattacagcagaaaaaagtga
DBGET
integrated database retrieval system
