Durio zibethinus (durian): 111298371
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Entry
111298371 CDS
T05242
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111298371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111298371
03036 Chromosome and associated proteins [BR:
dzi03036
]
111298371
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111298371
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111298371
PBAF complex
111298371
GBAF(ncBAF) complex
111298371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
eIF-3c_N
SANT_DAMP1_like
ZZ
Motif
Other DBs
NCBI-GeneID:
111298371
NCBI-ProteinID:
XP_022748845
UniProt:
A0A6P5Z8K0
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MPASPSGNLSLFFHFPSSNYRRGRWKRRNRERRAKHLQEEYDVVPEEDEEEENNNEDLDN
HGENSGDDAAAGALTDPSLAGSSESKALADGGVRISEFPVVVKRTMNCPHDSVMAIVEAE
RAGLVGDSKEHQQVALPVLENVSHGQLQAVSVDTPNPEKYVITPPAIMEGRGVVKRLGSR
VHVLPMHSEWFSPATVHRLERQVVPHFFSGKSPEHMPEKYMECRNHIVVKYMDNPEKRIT
VSDCQGLIGGISNEDLVRIVRFLDHWGIINYCAAASSHETWTGGSYSREDPKGEVHVPSA
ALKSIDSLIKFDKPKCRLRAADVYSSLSCHDDDFSDLDNRIRERLSENNCSSCSQPIPTS
YYQSQKEVDTLLCSDCFHDGRLVPGHLSIDFVRVYSTEDYGDLDGESWSDQETLLLLEAM
EIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGILENVEIPSMPKLVIVSKGDGQRLHS
NMNGSLPGPTLRDADSESRLPFANTGNPVMAMVAFLAFAVGPRVAAVCAHSSLAALAEDI
HKEGSGHGNRMNMESVHSREGGFHGSVHKKENSAIHSSFGQNEAEGHTLSAEKVKAAAKT
GLAAAAMKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETLLVKECEQVEKAR
QRFAAERARIASARFRPAGVTSQMSLPAVASSMVNNNIGNNRQHVQPSISGYASNQPVHP
HMPFISR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctccttcaggcaatctctccctttttttccattttccctcctccaattat
cgtcgaggtcgatggaagcggcggaaccgagagcgaagagccaaacatctccaagaagaa
tacgacgtcgttccggaggaagacgaagaagaagaaaacaacaacgaggacctcgacaac
cacggtgagaactccggggacgatgctgctgctggagccttaactgatccgtccttagcg
gggtctagcgagagtaaggccttggctgatggtggagttcgcatatcggagttccccgtc
gtggttaagcggacgatgaactgtcctcacgattccgtaatggcgatcgtggaggctgaa
cgggcgggtttggttggggatagcaaggagcaccagcaggtggcgctgccggttttggag
aatgtttcacacgggcagttacaggcggtttcggtggatactcccaatccggagaagtat
gtgattacccctcctgcgataatggaggggcgtggcgttgttaagaggttagggagtcgg
gttcatgtcctgccaatgcattcagagtggttttcaccggccaccgtgcatcgactagaa
agacaagttgtgccacattttttctctggaaaatcaccggaacatatgccggaaaaatat
atggaatgtagaaatcacattgttgtcaagtacatggataatccagagaagagaattaca
gtttctgattgccaggggttaataggtggtatcagtaatgaggatttagttcgaattgtt
cggtttcttgatcattggggaattatcaattattgtgcagctgcatcaagtcacgagaca
tggactgggggctcctactcaagggaggatccaaagggtgaggttcatgtgccatcagcc
gcattaaagtctatcgatagcttgataaaatttgataagccaaaatgtaggcttagggca
gctgatgtttattcatcattgtcatgtcatgatgatgatttctctgacttggacaacaga
atacgagagcgcttatctgaaaacaattgcagttcttgttctcagcctattcccacttca
tattatcagtcacagaaggaggttgacacgctattgtgctctgattgcttccatgatggg
agacttgttcctggtcatttaagcatagattttgttagggtatattcaacagaagattat
ggcgacctagatggagaaagttggagtgatcaggaaacactactgctgcttgaggcaatg
gaaatttacaatgagaactggaatgaaatagctgagcatgttggcactaagtctaaagca
caatgcatacttcattttctgcgtctacccatggaggatggcatattggaaaatgtagaa
attccaagcatgcccaagttagtgattgtttctaaaggagatggccaaagattgcactca
aacatgaatgggagtctaccagggcccacccttcgagatgctgattctgaaagcaggctt
ccttttgcaaatactgggaatccagttatggctatggttgcttttctggcctttgctgtt
ggaccaagagttgctgcagtctgtgcccactcatccttggcagcattggctgaagacata
cataaggaaggttcagggcatggtaataggatgaacatggagagtgtacatagtagagaa
ggtggttttcatggttccgttcacaaaaaagagaactctgcaatacacagttcatttggt
caaaacgaggcagagggtcatacactatctgctgaaaaggtaaaagctgccgccaaaacc
ggccttgcagctgcagctatgaaggcaaaactgtttgcagatcatgaggaaagagaaatt
caaaggctatcagctaatatcataaatcatcagttgaagaggttggagctgaagctcaag
cagtttgcagaagtggaaaccttactcgtgaaagaatgtgaacaagtggagaaagcaagg
caaaggtttgctgctgagagggctcgcattgcatcagctcgatttagacctgcaggagtc
acttcacaaatgagtctacctgcggttgcttcttccatggttaacaataacattggcaac
aataggcaacatgtacagccaagcatatctggatatgccagcaaccaaccagtacatccc
catatgccattcatttcacgctaa
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