KEGG   Durio zibethinus (durian): 111301512
Entry
111301512         CDS       T05242                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03013  Nucleocytoplasmic transport
dzi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111301512
  09122 Translation
   03013 Nucleocytoplasmic transport
    111301512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dzi03019]
    111301512
   03041 Spliceosome [BR:dzi03041]
    111301512
Messenger RNA biogenesis [BR:dzi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     111301512
Spliceosome [BR:dzi03041]
 Complex C
  Other components
   EJC/TREX
    111301512
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111301512
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd DSE1_N eIF2A Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_HPS5 NBCH_WD40 WD40_RFWD3 Beta-prop_EIPR1 Tricorn_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_IFT140_1st TRM82_WD Beta-prop_IFT80_2nd Beta-prop_WDR41 Beta-prop_NUP159_NUP214 PAC11 WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_SCAP CNH DUF7099 WD_LRWD1 TP_0598_N PROPPIN Beta-prop_WDR11_1st Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 111301512
NCBI-ProteinID: XP_022752974
UniProt: A0A6P5ZJJ9
LinkDB
Position
Unknown
AA seq 313 aa
MEEKIPMKNLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKAKDIE
LKGHTDSVDQLCWDPKHADLIATASGDKTVCLWDARSGKCSQQAELSGENINITYKPDGT
HIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPLL
RPVDTLMAHTAGCYCIAIDPTGRYFAVGSADSLVSLWDISDMLCVRTFTKLEWPVRTISF
NYTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYSA
DEGVFRIFGFESS
NT seq 942 nt   +upstreamnt  +downstreamnt
atggaggagaaaatacccatgaagaatctgcatagcagagagtatcaaggtcacaagaag
aaggtgcattcggtggcgtggaattgcacaggcaccaagcttgcttccggttctgtcgat
caaaccgctcgagtttggcatattgagcctcacggtcatggtaaggctaaagatattgaa
ttgaagggtcacactgatagtgtggatcaactatgttgggaccctaaacatgctgatctc
atagcaactgcatctggcgataaaactgtttgtttgtgggatgctcgcagtggaaagtgc
tctcagcaagcagaacttagtggggagaatataaacatcacctataaacctgatgggaca
cacatagctgttggtaatagggatgatgaattaacaatactggatgttcgaaaatttaag
ccaattcatagacgcaagttcaattatgaggtaaatgaaattgcttggaacatgacagga
gaaatgttctttttgacaactggaaatggtactgttgaagtacttgcatacccattactt
agaccagttgacaccctcatggctcacacagctggatgctactgcattgcaattgaccca
acaggaagatattttgctgttggaagtgctgattccttggtcagcctttgggatatatca
gatatgctttgcgtgcgaacatttacaaagcttgagtggcctgtccgcacaataagcttc
aattacacgggagactatattgcttctgccagtgaagacctatttattgatatatctaac
gttcacactggacgaactgtgcatcaaattccttgtcgagctgccatgaatagtgtggaa
tggaatccaaaatacaatttacttgcttatgctggagatgacaagaacaaatattcagct
gatgaaggtgtatttcggatatttggcttcgaaagcagttaa

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