Durio zibethinus (durian): 111301777
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Entry
111301777 CDS
T05242
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH10 isoform X1
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111301777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111301777
03041 Spliceosome [BR:
dzi03041
]
111301777
03009 Ribosome biogenesis [BR:
dzi03009
]
111301777
03016 Transfer RNA biogenesis [BR:
dzi03016
]
111301777
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111301777
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
111301777
Spliceosome [BR:
dzi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111301777
Complex C
U4/U6.U5 tri-SnRNP related factors
111301777
Ribosome biogenesis [BR:
dzi03009
]
Eukaryotic type
Pre-60S particles
Helicases
111301777
Transfer RNA biogenesis [BR:
dzi03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
111301777
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
nSTAND3
Late_protein_L2
Tnp_IS1634_N
Motif
Other DBs
NCBI-GeneID:
111301777
NCBI-ProteinID:
XP_022753458
UniProt:
A0A6P5ZKQ0
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MEEESATLGKRKSPEKADVTGTPKQESASRRRTLARTCVHEVAVPSGYISTKDESIHGTL
SNPVYNGEMAKTYKFELDPFQQVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQ
RVIYTSPLKALSNQKYRELHQEFQDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVL
KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICHLHKQP
CHVVYTDFRPTPLQHYVFPMGGSGLYLVVDENEHFREENFMKLQDSFIKQRLGDWNNSAN
GKSSGRTAKGGSASGGSDIYKIVKMIMERKFHPVIVFSFSRRECEYHAMSMSKLDFNTQE
EKNAVEEVFRNAVLCLNEEDRCLPAIELMLPLLMRGIAVHHSGLLPVIKELVELLFQEGL
IKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGIC
IIMIDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQISAEHVIRNSFHQFQ
YEKTLPDIGKKVSRLEQEAALLDASGEAEVAEYHKLKLEIAQLEKKLMSEITRPERVLYY
LDPGRLIKVREGSIDWGWGVVVNVVKRPSAVGTLPARGGGYIVDTLLHCSPGSSENGARP
KPCPPCPGEKGEMHVVPVQLPLISALSKIRISIPPDLRPPEARQSLLLAVQELGTRFPQG
LPKLNPVTDMKIEDLEIVELVKQIEELEKKLFAHPLHKSQDEHQIRSFQRKAEVNHEIQQ
LKSKMRDSQLQKFRDELKNRARVLKKLGHIDADDVVQLKGRAACLIDTGDELLVTELMFN
GTFNDLDHHQVAALASCFIPVDKSSEQIQLRTEIAKPLHQLQESARRIAEIQHECKLDVN
VDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQRFTYCTQ
LRAAAQAVGEVDLENKFAAGSESLRRGIMFANSLYL
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaatcagctacactagggaaacgtaaatcacctgagaaggcagatgttaca
gggacccctaagcaagaatctgcctccagacggagaactctagctcgtacatgtgtgcac
gaggttgcagttccaagtgggtacatttcaactaaagatgaatcgattcatggaaccctc
tcaaatcctgtgtacaatggggaaatggctaaaacttataagtttgagcttgacccattt
cagcaagtatctgtggcttgcttggaaagaaatgagtcagttttggtctcagcacataca
tctgcaggtaaaactgccgttgctgagtacgccattgcaatggcctttagagataagcag
agggtcatatatacttcaccattgaaagctttgagtaaccagaagtacagggagctgcat
caagagttccaagatgtggggctgatgaccggtgatgttaccttatcacctaatgctagt
tgtctggtcatgacgacagagattctgagagggatgctttataggggttcagaggttttg
aaggaggttgcatgggttatctttgatgaaatccattatatgaaagacagggaaagaggg
gttgtttgggaagagagtataatatttttgccaccagctataaaaatggtttttctttca
gcgacaatgtccaatgccactgagtttgcggagtggatttgtcatttacacaaacagccc
tgccatgtggtgtacacagatttccggccaactccgttgcagcattatgttttccccatg
ggtgggagtggattgtatcttgtggttgatgagaatgagcatttcagggaggaaaacttt
atgaagctccaggattcattcataaagcagagactgggtgattggaacaatagtgcaaac
gggaaaagtagtgggagaactgcaaaaggtgggagtgcttcagggggttctgacatatac
aaaattgtgaagatgattatggaacggaaatttcacccagtcattgtttttagcttcagt
agaagagagtgtgaatatcatgcaatgtctatgtccaagcttgactttaatacacaggag
gaaaagaatgctgtagaagaggtttttcggaatgcagtactctgcttgaatgaagaagat
agatgtttgcctgctattgagttaatgttacccctgcttatgagaggcattgctgtacat
cattctggtcttcttcctgttatcaaggaattggtggagcttcttttccaggaaggcctt
ataaaggcgctttttgccactgaaacttttgcaatgggtttaaatatgcctgcaaaaact
gttgtatttacttctgttaagaagtgggatggtgatagccatcgttatattggatccggt
gagtatatccagatgagtggaagggcggggcgccgtggcaaagatgaacgtggtatttgt
atcattatgattgatgagcagatggagatgaatacactcaaggacatggttttgggtaaa
ccagctcctttagtcagtactttcagactgagttactattcaattttgaatctaatgagc
cgtgcggaaggccagatctctgctgagcatgtgataaggaattcgttccaccagtttcag
tatgagaagaccttacctgatatagggaagaaggtttcaaggctggaacaggaagctgcc
ttgctagatgcttcaggagaggctgaagtagctgaatatcataaactaaaacttgaaata
gcccagttagagaagaagttgatgtcagaaattactaggcctgaaagagttctttattat
cttgatcctggacggctgatcaaagtaagagaaggcagtatagactggggctggggagtc
gtagttaatgttgttaaaaggccctctgcagtaggtacattgccggcacgtggtggtggt
tatattgtggatacattacttcattgctctcctggttctagtgagaatggtgcccgacca
aaaccatgcccaccctgtcctggggagaagggtgaaatgcatgtggttccagtccagttg
cctcttatttctgcactaagcaaaatcagaatatccatacctcctgatcttcggccaccc
gaagccaggcagagtttattgcttgcagtgcaggagctaggaactcgatttccacaaggg
cttccaaaacttaatcctgttacggacatgaaaattgaagatttggaaattgttgagttg
gtgaaacaaattgaggaactcgaaaagaagttgtttgctcatccactccacaagtctcaa
gatgagcatcaaattagatctttccagaggaaggcagaagtgaatcatgagattcaacag
ctcaagtcaaaaatgcgtgattcccagcttcaaaaattccgtgatgaacttaagaaccgt
gcgagggtcctgaaaaagctaggccatattgatgctgatgatgttgtccagttaaaggga
cgggcagcctgtttaatagacactggagatgaattgcttgtaacagaactgatgtttaat
ggtacattcaatgatcttgatcatcaccaagtagcagcccttgcaagttgttttattccg
gtagataaatcaagtgaacaaatacagttgaggacagagattgctaaaccattacatcaa
cttcaagaaagtgcaaggagaatcgcagagatacaacatgaatgcaaattggatgtaaat
gtagatgagtatgtggaatcaacagtgagaccattcttgatggatgtgatttattgttgg
tctaagggtgcaacttttgcagaggtaatacagatgactgatatatttgagggtagcatt
attaggagtgctagaaggcttgatgagtttttgaaccagagatttacttattgtactcag
ctccgtgctgctgctcaagctgttggagaagttgatttggaaaacaagtttgctgcggga
agtgaaagcctacggagaggtatcatgtttgcgaactccctttatctttaa
DBGET
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