Durio zibethinus (durian): 111303850
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Entry
111303850 CDS
T05242
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03022
Basal transcription factors
dzi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111303850
09124 Replication and repair
03420 Nucleotide excision repair
111303850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111303850
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111303850
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111303850
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111303850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
111303850
NCBI-ProteinID:
XP_022756061
UniProt:
A0A6P5ZUI8
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MASRHVTKRAKYKTTIKDPGTPGTLRLTLEKILFVPHNPKSAGKLDVEFRFIKGQKHTKE
GSNKPPWLNLTNNQNGSFIFEFENYSDLQYCRDFVGKVLAKSGEVSEKPTVTYPDEQLSA
AEMELRIKLLQEDSELQKLHKQFVLSDVLTEAEFWATRKKLLDTEANKKTKQRLGFKSAM
ISDIRPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLSYVPNKMSEKVFWTKYFRAEY
LHSTKNSIAAAAEAAEDEELAVFLKLDDILASEARWKIRRVDPTLDMEADEGDDYTHLPD
HGIFRDGSKDMTESQNELYRRTLSQDINRHAAVVLEGRAVDVDLDDTRAVAEALAWSKQE
SSTKRESDGDTNQERLARVSRMTEIEDLQGPNNLPSAPLCIKDPRDYFDSQQANALRTSG
DALGRTEQIKCSLSTQEVYGSLRQSISVIKAMGLKDPIVKPEVAHQVFDALTNSISTTKY
HIGKNPHESVLDRLPKKTKDELLHHWTSILELLKHFWASYPITTSYLYTKVNRLKDAISN
IYPQLEEIKGSVPSELRHQVSLLVHPMLQALDAAIQHYEADMQKRSTGSVDKPNGYV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccgtcacgtgactaagcgagctaagtacaaaaccacaatcaaggatcctgga
actcccggtactcttagattgacacttgagaaaattttattcgtgcctcataatccgaag
tcggctggaaagcttgatgttgagtttcgattcattaaaggtcaaaagcatacgaaggag
ggatcaaataagccgccgtggcttaatcttacgaataatcagaatgggagtttcatcttt
gagtttgaaaattactccgatctccaatattgtcgagattttgtgggaaaagttcttgca
aagagtggagaagtttctgaaaaacctactgttacatatcctgatgaacaactcagtgca
gcagaaatggaactccgaattaagttgttacaggaagatagtgaactgcagaaacttcac
aagcaatttgtgcttagtgatgtcctcacagaggctgaattttgggcaacacggaagaag
ttgttggatacagaggccaacaagaagacaaaacaacggctgggttttaaaagtgctatg
atttctgacatcagaccatcaactgatggtcggacaaacaaagtcacatttaatttgacc
ccagagatcattcttcaaatttttgctgagaaaccagctgttcaccgtgcatttttaagt
tatgttcctaacaagatgtcagaaaaggttttctggaccaaatattttagagcagaatac
ctacatagtacgaaaaatagcattgctgctgcagcagaggctgctgaagatgaggaactt
gctgtttttctcaagctggatgacatattggcaagtgaggctcggtggaagatcaggcgg
gttgatccaactctggacatggaggctgatgagggggatgattatacacatcttccagat
catggaatctttcgtgatggtagtaaggacatgactgaatcacaaaatgagctctacaga
agaactctatcacaagatattaaccggcatgctgcagttgttctcgagggaagagctgta
gatgtggacttagacgacacaagggctgtagcagaagcgcttgcttggtcaaaacaggaa
tcatctactaagagagaatctgatggggatacaaaccaggagagattagctagggtatca
aggatgactgaaatagaagatcttcagggaccaaataatcttccatcagcaccactttgc
attaaggatcctcgagattattttgactctcaacaagctaatgcacttagaacttccgga
gatgcacttggtagaactgaacaaataaaatgcagtttgagcacccaggaggtgtatggt
tctttgagacagtccatctcagtgatcaaagctatggggttgaaagatcctatagtcaag
ccagaagttgctcatcaagtttttgatgctttgaccaatagtatctcaactaccaaatat
catatcggtaaaaatcctcatgaaagtgttctggacagattgccaaagaaaactaaagat
gaactattgcatcattggacatcaatccttgaactactcaaacatttttgggcatcatat
cctatcaccacctcttacctctataccaaggtaaacagactgaaggatgccatctcaaat
atctatccacagctagaggagattaagggatctgtcccctcggaacttcggcatcaggtt
tccctccttgtacatccaatgcttcaggctctggatgccgctattcaacattatgaagca
gacatgcagaagagatccacagggagtgtagataaaccaaacggatatgtctag
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