Durio zibethinus (durian): 111303919
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Entry
111303919 CDS
T05242
Name
(RefSeq) protein SMG7-like isoform X1
KO
K14409
protein SMG7
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111303919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111303919
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111303919
mRNA cycle factors
Common to processing body (P body) and stress granule
111303919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
111303919
NCBI-ProteinID:
XP_022756172
UniProt:
A0A6P5ZUH5
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MMIVQMDKMSAPSSRERAQRLYEKNIELENNRRRSAQARIPSDPNAWQQMRENYEAIILE
DHAFSEQHNIEYALWQLHYKRIEELRAHYSAALASAGSNASQGVKIPPRPDRLTKIRLQF
KTFLSEATGFYHDLILKIRAKYGLPFGYFSDDSGSRIVMDKDGKKSADIKKGLVSCHRCL
IYLGDLARYKGLYGDGDSKSREYAAASSYYLQAASIWPSSGNPHHQLAILASYSGDELVA
VYRYFRSLAVDNPFTTARDNLVVAFEKNRHNYSQLPGDVNTPLVKEPAVRLSGKGRGKVE
AKLASNDANRESSPANEKVSGVQDTLKSFCIRFVRLTGILFTRTSLETFADVLSLVSHDL
CELLSSGPEEELNFGIDAAENALLLVRLVSILVFTVHNLKRESEGQSYAEIVQRAALLQN
AFTSVFELMGHIVERCSQLQDISSSYTLPAILVFVEWLACCPDVAAAGSDVDEKQSITRS
LFWKHCISFLNKILSIRPMCIDYDEDETCFFNMSRYEEGETENRLALWEDFELRGFLPLV
PAHTILDFSRKHSFVSDGDKEKKARIKRILAAGKALANVIRVDQKNVCFDSKAKKFLIGV
EPSEDVTFSFSTPLATNGMGHETPFEKTISIGNMRTTPQPRMVGEEDDDDEVIVFQPAVS
EKRTEVIGPNMPPSETLKLDQSSSAGDLKFYGSTMSVPHNSVRQHNTFDASSPLSVSVGS
ILPQHLQPVQMHASGWSVEEATSLISSLKGLTMLENGHLTKPEMQDNVGLSHPATRSVGI
QQPISAGAGGMRYSQTKVPENVIASRIDAIMSSGVTTDALAAKATLASQGGMRKNPVSRP
ARNLGPPPGFSPVPPKPPHVSVSASDLENPLMDDYSWLDGYQLTSSLKGAGLNSSLNHAF
HADSQYVNNSSNGLTETVTFPFPGKQVPTVQFEMERQGWQDYHTLEHLKIQHGQMLQQQQ
QQQQLMKGNQQFTSLPEQYQGQSLWTGRYFV
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgatgatagtgcagatggataaaatgtctgctccttcatccagggagcgcgcacagcgt
ctttatgagaagaatatagagttggaaaataatcgtaggagatcagctcaggcacgaata
ccttcagatcccaatgcctggcagcaaatgcgtgagaactatgaggcaataattcttgag
gaccatgctttttctgagcagcacaatattgaatatgctttgtggcagttacattacaag
cggattgaggaactaagagcacattatagtgctgctctagcatctgcaggatcaaatgca
tctcagggtgtgaaaattcctccacgacctgaccggctaacaaaaataagactgcagttt
aagactttcctttcagaggcaacaggattttatcatgatctgattttgaaaatcagagca
aagtatggacttccatttgggtacttttctgatgattcaggaagccgaattgttatggac
aaagatgggaagaaatctgctgacataaaaaaaggtttggtgtcatgtcaccgttgtttg
atatacttgggagacctagcacggtacaaaggattatatggagatggagactctaaatca
cgtgaatatgcagcagcttcaagttactacttgcaagctgcatcaatttggccatcaagt
gggaatccacatcatcagctagctatattggcgtcctactctggagatgagctggtggct
gtttatcgatattttcggagtttggcagtggataatccctttacaactgctagggataac
ttggtcgttgcatttgagaagaatcgtcataattactctcagcttcctggggatgttaat
actcccttggtcaaggagcctgctgtaaggttatcaggaaagggtagagggaaagtggaa
gcaaaacttgcatctaacgatgccaacagggaatcaagccctgctaatgagaaagtatct
ggtgttcaggatactttgaagtccttttgcattcgatttgtgcgattaactggcattctt
tttacacgcacaagcctggagacatttgctgatgttctttctctggttagccatgattta
tgtgaacttctctcctcggggccagaagaggaactgaattttggcatagatgctgctgag
aatgcacttctccttgttaggctggtttccattcttgtattcacagttcacaatctgaag
agggagagtgaaggtcaatcatatgctgaaattgtacagcgtgctgcattacttcagaat
gcattcacttccgtttttgagttgatgggacatatagtggagagatgttcacagctccag
gatatttcttccagctacaccttacctgctattctggtttttgtagaatggttggcttgc
tgtccagatgttgcagcagctggcagtgatgtggatgagaaacagtcaattactagatca
cttttctggaaacattgcatatcatttctgaataagatcttgtcaattaggccaatgtgc
attgattatgatgaagatgagacctgctttttcaatatgagcaggtatgaagaaggagaa
actgaaaaccgtcttgcactgtgggaggactttgagttgcgagggttcttgcctcttgtt
ccggcacacaccattttggacttctcaaggaaacattcctttgtaagtgatggcgataaa
gaaaagaaagctcgtatcaagagaattttagcagctgggaaggctttagctaatgtcatt
agggttgatcagaaaaatgtttgttttgattcaaaagcaaagaaatttcttattggtgtt
gagccatctgaagatgtcacattcagcttttctaccccactggcaacaaatggtatgggg
catgaaaccccatttgagaagacaattagtattggaaatatgcggacaacccctcaacct
agaatggttggggaagaagatgatgatgatgaagtgattgttttccagccggctgtgagt
gagaagagaactgaagtgattggtcccaacatgcccccctctgagactttgaagcttgat
caaagtagctctgcaggtgatctcaaattttatggcagtaccatgtctgttcctcataat
agtgttcgtcaacataatacatttgatgctagttctccactgtcggtatctgttggtagc
attctccctcagcatctgcagcctgttcaaatgcatgcatctgggtggtctgtggaagaa
gctacttctctgattagtagcttgaaaggtttgacaatgttggagaatgggcatttaaca
aaacctgagatgcaagataacgtaggcctttctcatcctgctactcgctcagttggtatc
caacaacccatcagtgctggtgctggtggtatgcgctacagtcagacaaaagtgcctgaa
aatgtgattgcatccagaattgatgctattatgtcatctggagttaccactgatgctttg
gctgctaaagctaccttagcttcgcaaggtgggatgcggaagaacccagttagccgccca
gctaggaatcttggtcctccaccaggttttagccctgttcctccaaagccaccacacgta
tctgtttctgcatcagatttggagaacccccttatggatgattatagttggttggatgga
tatcagttgacatcatcattgaaaggcgcgggacttaatagttccctcaatcatgcattt
catgcagattcccagtatgtcaataatagtagcaatggcttgactgaaacagtaactttt
cctttccctggaaaacaggttccaacagtgcagtttgaaatggaaaggcagggctggcag
gattaccatactcttgagcatctgaaaattcaacatggacagatgttgcagcaacagcaa
cagcaacagcaactcatgaaaggaaaccagcagtttacctcactgcctgagcagtatcaa
ggacaatcactctggacaggtcgttattttgtgtga
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