KEGG   Durio zibethinus (durian): 111304480
Entry
111304480         CDS       T05242                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03018  RNA degradation
dzi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111304480
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111304480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dzi03019]
    111304480
   03041 Spliceosome [BR:dzi03041]
    111304480
Messenger RNA biogenesis [BR:dzi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111304480
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     111304480
Spliceosome [BR:dzi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    111304480
SSDB
Motif
Pfam: LSM RimP_C Hfq
Other DBs
NCBI-GeneID: 111304480
NCBI-ProteinID: XP_022756760
UniProt: A0A6P5ZW75
LinkDB
Position
Unknown
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLSGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPMKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcgggcaggaaagaaacagtcttggatttggcaaagtttgtagacaaaggtgttcag
gtcaaactcagtggtggtagacaagtcacagggaccctaaaaggatatgaccagctacta
aatcttgtcctggatgaagctgtagaatttcttcgagatccagatgatccgatgaagact
acggatcagaccagacgccttggcttgatagtttgtaggggtactgcagttatgctggtg
tcaccaactgatggcacagatgagattgccaatccattcatccagccagatggagcttga

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