Durio zibethinus (durian): 111304978
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Entry
111304978 CDS
T05242
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111304978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dzi03041
]
111304978
03009 Ribosome biogenesis [BR:
dzi03009
]
111304978
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111304978
Spliceosome [BR:
dzi03041
]
Complex A
U2 snRNP components
U2 related factors
111304978
Complex B
111304978
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111304978
Ribosome biogenesis [BR:
dzi03009
]
Eukaryotic type
90S particles
Helicases
111304978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
AAA_7
T2SSE
ABC_tran
AAA_30
FtsK_SpoIIIE
TsaE
NACHT
Motif
Other DBs
NCBI-GeneID:
111304978
NCBI-ProteinID:
XP_022757800
UniProt:
A0A6P5ZZ66
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MGTERKRKVSLFDVVDETSAKAAKSNGGGLGAMNFNSSINKWNGRPYSQRYYEILEKRKT
LPVWQQKEEFLQVLKANQTLILVGETGSGKTTQIPQFVLDAVDIETPDKRRKTMIACTQP
RRVAAMSVSRRVAEEMDVTIGEEVGYSVRFEYCSSARTVLKYLTDGMLLSEAMTDPLLER
YKVIILDEAHERTLATDVLFGLLTEVLKNRSDLKLVVMSATLEAEKFQGYFNGAPLMKVP
GRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPRGDILVFLTGEEEIEDACRKITKEIG
NMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEDGPPGRKIVVSTNIAETSLTIDGI
VYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNND
LQPQTYPEILRSNLASTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEG
NLTKSGQIMSEFPLDPQMSKMLVVSSEFNCSNEILSIAAMLSVPNCFVRPREAQKAADEA
KARFGHIDGDHLTLLNVYHAYKQNNEDATWCYENFINHRALKAADNVRQQLVRIMSRFNL
KLCSTDFNGRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEW
VIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLENFPQCEAKCVLEKLYKKREKDREE
SRNRR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggagaggaaaaggaaggtgagcttgttcgatgtggtggatgagacatcggct
aaggccgcaaaatcgaacggcggaggattaggggcgatgaacttcaacagctcgatcaac
aagtggaatggaaggccttattcccaaaggtattacgagattttggaaaagaggaaaact
ctccctgtttggcaacagaaagaggagtttttgcaagtcttgaaggccaatcaaaccctt
atcttagtcggcgaaaccggtagcggtaaaaccacccagatacctcagtttgtattggac
gctgttgatatagaaactccggataaacgtaggaaaactatgattgcctgtacccagccg
cgaagagtggctgcaatgtctgtttcgcggcgcgttgctgaagaaatggatgtaactatt
ggagaggaggttggttatagtgttcgtttcgaatattgcagtagtgcaagaactgtttta
aagtatctaacagatggtatgcttttaagtgaagcaatgactgatcctcttttagaaagg
tataaagtaattattcttgatgaggcccatgaaagaactttggcgactgatgtgctattt
gggcttctgacagaagtgttaaagaatcgatctgacctgaagcttgttgttatgagtgca
acactggaggctgaaaagtttcagggttattttaatggtgcaccacttatgaaggttcct
ggtaggcttcaccctgtggagatattctacactcaggaacctgaaagggattacttggag
gccgcaattcggactgttgtccagatacacatgtgtgagcctcgtggtgacatacttgtt
ttcctgactggagaggaggagatagaagatgcctgtcgcaaaataacaaaagaaattgga
aacatgggggatcaagtaggacctgttaaagtagtgcctttatattcaactcttccacca
gcaatgcaacagaagatttttgaacctgctccgcctccttcgaaggaggatggccctcct
ggaaggaagattgtggtgtcaacaaacattgctgaaacttccttgaccattgatggcatt
gtttatgttattgacccagggttttccaagcaaaaagtttataacccacgagtgcgtgtt
gagtccttactggtatctcccatatcaaaggcaagtgcacaccaaagatctgggcgtgct
ggaagaactcaacctggcaaatgtttcaggctctacactgaaaagagttttaataatgat
ctgcaaccgcagacctatcctgaaatattacgatcaaaccttgcaagtacagttctcacc
ttgaagaaactgggaattgatgatctggtgcattttgattttatggacccgcctgctcca
gagacattgatgcgggcattggaagtgttgaattacttgggagcattggatgatgagggg
aacttaacaaagtcgggacagatcatgagtgaattccccttggatcctcaaatgtcaaag
atgctcgtagttagttctgagttcaactgttcaaatgagattctttcaattgctgccatg
ctttcagtacccaattgctttgtacggcctagggaggcgcaaaaagctgcagatgaagca
aaagctaggtttgggcatattgatggtgatcatctcacgcttttgaatgtgtaccatgct
tacaaacaaaacaatgaggatgcaacttggtgctatgagaattttatcaaccatagagcg
ctgaaggctgccgataatgttagacaacagctggtgcgcatcatgtcgaggtttaacctg
aagctgtgcagcactgatttcaacggccgtgactactatgtcaacattagaaaggccatg
cttgctggttatttcatgcaggtagctcatctggagcgcacaggacactacttgacagtt
aaagacaatcaggtggtgcacttgcatccatcaaattgcctggatcacaaaccagagtgg
gtcatctacaatgagtatgtcctgacaagccggaatttcattcgtactgtgacagatatt
cgtggtgaatggttagttgatatagcaccgcattattacgatcttgaaaatttcccacag
tgcgaggcaaagtgtgtccttgaaaaactttacaagaaaagggagaaggatcgggaggag
agtaggaacagaagatga
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integrated database retrieval system
