Durio zibethinus (durian): 111305013
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Entry
111305013 CDS
T05242
Name
(RefSeq) DNA mismatch repair protein MSH6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111305013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111305013
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111305013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
Motif
Other DBs
NCBI-GeneID:
111305013
NCBI-ProteinID:
XP_022757899
UniProt:
A0A6P5ZYS8
LinkDB
All DBs
Position
Unknown
AA seq
1328 aa
AA seq
DB search
MASSRRQSNGRSPLVNQQRHITSFFSKTNSPSPSPSPTFAKQTSKLNPNPKPNRSPSKSP
SPSLITPSPAQSKPKKPLLVIGQTPSPTPSTPVEKSYGKEVLEKRIRVYWPLDKAWYEGV
VKFFDKESGKHLVQYDDAEEEELDLGKEKIEWVKESTGRLKRLRRGGTSSAFKKVVIDFE
DEDVAENGEEKSNADDDDSSDEDWGENVAKEVSEDAEEEDMDLVDEKEEEEDEELEEEEE
VMKMWKRKGGGKTESKKRKACGGGGKLESGKKSKTGASVGNKEEFKLPLVEPVKKTESDK
ASNGFDNALVGEASERFGKREAEKFYFLGPKERRDVNRKRPGDINYNPKTLYMPPDFLKS
LSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPERN
FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGAKDKVVKREICAVVTKGTITEGEML
STNPDPSYLMAVTENCQSSTNQNEERVFGVCAVDVSTSRIILGQFGDDSECSALCCLLAE
LRPVEIIKPTKLLSFETEKAMLRHTRNPLVNELLPSAEFWDADKTVHEIKTFYKRIKDQS
AARSVSDVGPNDANSSEEDRPGCLPAVLSNLLSAGANGSLALSALGGTLYYLKQAFLDET
LLRFAKFESLPSSGFSGTAPKPYMFLDAAALENLEIFENSRNGDSYRTLYEQLNHCVTAF
GKRLLKTWLARPLYQIDLIKERQDAVAGLKGENQSYAVEFRKALSRLPDMERLLARIFAS
SEANGRNANKVILYEDAAKKQLQEFVSALRGCELMVQACSSLGVILENVESTQLHHLLTA
GKGLPNIHSILKHFKDAFDWVDANNSGRIIPHEGVDLEYDSACEKVKEIESSLTKHLKEQ
RKLLGDSSITYVTVGKEVYLLEVPENLRGSVPQDYELRSSKKGFFRYWTPYIKKSLGELS
QAESEKETALKNILQRLLGRFCEDHNKWRQLVSTTGELDVLISLAIASDFYEGPTCRPFI
LGFSCSNEVPCFSAKGLGHPILRSDSLGKGAFVPNDITIGGSGHASFLLLTGPNMGGKST
LLRQVCLAVILAQVGADVPAEHLELSPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLS
SATKHSLVALDELGRGTSTSDGQAIAESVLEHFVHKVQCRGMFSTHYHRLAVDYQNNSKV
FLCHMACQVGNGNGVEGVEEVTFLYRLTTDACPKSYGVNVARIAGLPDSILLTAASKSRE
FEAIYGKHRKECEDNLPIQSCPDKMVAIIRELISVTANARNLNTLEGTSVGSLTELQRRA
RTLLLQQH
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcgcgtcggcagagcaacggtaggtcaccgctcgttaatcaacagcgccat
attacttcctttttctctaaaacgaactctccttccccctccccttcccccactttcgcc
aaacaaacctctaaactcaaccctaaccctaaaccaaaccggagtcctagtaaaagccca
agccccagcctgatcactccttcccctgctcaatccaagcccaaaaagcccctcctagtt
attggccaaacaccctccccgactccctcgactccggtcgagaaatcgtacggcaaagag
gtgctcgagaagaggatcagggtttactggccgttggataaggcgtggtatgaaggtgtg
gtgaagttttttgataaggaatcgggtaagcatttggttcagtatgatgatgctgaggaa
gaagagttggatttgggaaaggagaagattgagtgggttaaagaaagcacgggaaggctt
aagcggttgcgtcgagggggtacttcttcggcttttaagaaagtggtgattgattttgag
gatgaggatgtggcagagaatggagaggaaaagagtaatgctgatgatgatgattctagt
gatgaagattggggggagaatgtggcgaaggaagtgagtgaggatgctgaggaggaagat
atggatttggtggatgagaaagaggaggaagaagatgaagaattggaggaagaggaggag
gtaatgaaaatgtggaaaagaaaaggcggtggaaagaccgaatctaaaaaacggaaggcc
tgcggaggaggagggaaattggagtctggcaaaaagagtaagaccggtgcaagtgttggt
aataaggaagagtttaagctgcctttggtggaacctgtgaagaaaacagaaagtgataag
gcttctaacggttttgataatgctttggtgggtgaagcatcagaaaggttcggcaagcgt
gaagcagagaagttttacttccttggacccaaggagcgtagggatgtgaatagaaaacgt
cctggagatataaactacaatccgaaaactttatacatgcctcctgatttcttgaagagc
ctatcaggtggccagaggcaatggtgggaatttaagtcaaagcatatggacaaagttctg
tttttcaagatgggtaaattttatgaactttttgaaatggatgcacatataggagccaaa
gaactggatttgcagtacatgaagggggaacaacctcactgtggatttccagagagaaac
ttctctatgaatgtggagaaattagctagaaagggttatcgagttcttgtagtagagcaa
acagaaactcctgaacagctggagcttcgtcggaaagagaaaggtgccaaggataaggtt
gtcaaacgtgaaatatgtgcagtggttactaaaggaaccataactgagggagaaatgctg
tcaacaaatcctgacccttcttacctgatggcagtgactgaaaactgtcaaagttcaacc
aaccagaatgaggagcgggttttcggtgtgtgtgcagttgatgtttcaactagcaggatt
attcttggacagtttggggatgattctgagtgcagtgcattgtgttgtctattggctgag
ctaaggccagtagaaattataaaacccactaaactgctcagttttgaaactgagaaggca
atgctgagacatacaagaaatcccttagtgaatgagttgctcccatctgcagaattttgg
gatgcagacaaaactgttcatgaaatcaaaaccttctacaagcgtatcaaggatcaatca
gctgctaggtctgttagtgatgtgggtccaaatgatgctaattcttctgaggaagatagg
ccaggttgcctgccagctgtcctttccaatctactgagtgctggtgcaaatggcagccta
gcactctcagctcttggaggcactctttattacctaaaacaggcttttctagatgagaca
ttacttagatttgcgaagtttgagtcacttccatcctctggtttcagtggcactgctcca
aaaccctacatgtttcttgatgctgctgcactcgaaaaccttgagatctttgaaaacagt
agaaatggagactcttacaggacactctatgaacaattgaatcactgtgtgacagcattt
gggaaaaggttgctaaaaacatggcttgctaggccattatatcaaatagatttaattaag
gaacgtcaagatgctgtagcgggcctaaagggtgaaaatcaatcatatgcagttgaattt
cgaaaggcattgtccaggcttcctgacatggagaggttgcttgcacgtatctttgctagc
agtgaggctaatggaagaaatgcaaataaagttattttatatgaagatgctgcaaagaaa
caactccaggaattcgtatcagcactacgcggttgtgaattaatggttcaagcatgttct
tcccttggtgtcattttggaaaacgtggagtctacacagcttcatcatttgttaacagct
ggtaaaggtcttccaaatatccattctattcttaagcatttcaaggatgcgtttgattgg
gttgatgccaacaattctggacgtataatacctcatgaaggagttgatctggaatatgac
tctgcatgtgaaaaagttaaggagattgaatctagtttgacaaaacacctcaaggaacag
cggaagttacttggagattcatcaatcacctatgtcacagttggaaaagaggtatatcta
ttggaagtgccagaaaacttgcgtggaagtgtccctcaggattatgagttacgatcatcc
aaaaagggcttcttccgttactggactccatatatcaagaagtccctaggagaactgtcg
caagctgaatccgaaaaggagactgctttaaaaaacattctccagaggttacttggacga
ttttgtgaggatcacaataaatggcggcagctagtttcaacaacaggagaactggatgta
ttgatcagtctagcaattgcaagtgatttttatgaagggccaacatgtcgtccttttatc
ctgggcttttcatgttcaaatgaagtgccatgcttttctgcaaaaggattaggacatcct
attctcagaagtgattctttaggcaagggtgcatttgtccccaatgacatcactattggg
ggttctggtcatgcaagttttctccttcttactggtcctaacatgggtggaaagtcaact
cttcttcgccaagtttgcttggctgtgattttggcccaggtaggagctgatgtccctgca
gaacatttggaactatctcctgttgaccgaatctttgtccggatgggtgccaaagatcat
attatggcaggacagagtacatttttaacagagctttctgagactgcattaatgctgtcc
tcagcaactaaacattcactcgtggcattagatgaacttggacgtggaacatcaacgtct
gatggacaagctattgcggaatcagttcttgaacattttgtacataaggtgcagtgccga
ggaatgttttcaactcattaccaccgactggctgtggactatcagaacaattccaaggtc
tttctctgccatatggcatgccaagttggaaatggaaatggagttgaaggcgtggaagaa
gttacatttctctacaggttgaccactgatgcctgtccaaaaagttatggtgtgaatgtt
gcacgaatagctgggcttcccgactcaatactgctaacagctgcttctaagtctagagaa
tttgaggctatatacgggaaacacagaaaggaatgtgaagataacttgccgatacaaagt
tgtcctgataagatggtagctattattcgagaattgatcagcgttacagcgaatgcaagg
aacttaaacactttggaaggcacttctgttggctccttgactgaacttcaacgtagggca
aggacactacttctgcagcaacattga
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