Durio zibethinus (durian): 111305306
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Entry
111305306 CDS
T05242
Name
(RefSeq) protein CHROMATIN REMODELING 8 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
111305306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dzi03036
]
111305306
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111305306
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
111305306
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
111305306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DUF3371
Motif
Other DBs
NCBI-GeneID:
111305306
NCBI-ProteinID:
XP_022758451
UniProt:
A0A6P6A139
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MKEEEDRVLLSSLGVTSAYPEDIEQDILAKAENNAGDGSEVGGTTEEEPPDKSESNDPSL
SANQAKLLNKLRAVEFEIDAVASTVEERRDVACGDHQADHDDDDSTERGNREDDESVMQF
SSRDLTLQHALATDRLKSLKKTKAQLEKELSGLLKESSSEGIKNDKLIKDLVKEEPRLKR
KSKEIQNPSKNKEKRKKTVSFNEDVDFDAVLDAASVGFVETERDELVRKGILTPFHKLKG
FERRLQQPGTSNEHIVPNEEDENDDLVSASVARAAKSISEAAQARPSTKLLDSEALPKLD
APTFPFQRLKKPLRFPQATVVKETKGSKQKRRRPLPDKKWRKRISYEERDIEEGEDVRDN
LTSHDEEENQEESEDVDDNDPPYVTLEGGLKIPETIFSKLFDYQKVGVQWLWELHCQRAG
GIIGDEMGLGKTVQVLSFLGALHFSKMYEPSIIVCPVTLLRQWKREARRWYSRFHVEILH
DSAQDPDYKKKQAKSSGESDYESEGSLDSDYEGNFSSKSSKKWDSLINRVLRSRSGLLIT
TYEQLRLLGEKLLDIEWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLT
ELWSLFDFVFPGKLGVLPVFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLL
RRMKADVNAQLPKKTEHVLFCSLTAEQRSVYRAFLASSEVEQILDGSRNSLYGIDVMRKI
CNHPDLLEREHSCQNPDYGNPERSGKMKVVAQVLKVWKEQSHRVLLFAQTQQMLDILENF
LISSDYDYRRMDGHTPVKQRMALIDEFNNSDDIFIFILTTKVGGLGTNLTGADRVIIFDP
DWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRR
FFKARDMKDLFTLKDNGESGSTETSNIFSQLSEDVNIIGAQKDTQHKQEHSKAAVPQAGN
ADRGKGNCSNTALSIRKGKEKDDHSDGEVDEEKNILRSLFDAHGIHSAVNHDAIMNANDE
EKMRLEEQASQVAQRAAEALRQSRLLRSHDSISIPTWTGKSGAAGAPSAVGKKFGSTLNS
QLLKPAGESSSSGMAAGAAAGKALSSAELLARIRGNQEQAVGAGLEHQFGLASSSSHRAR
SVVNGTSRSSSNISSVQPEVLIRQICTFIQQRGGSTDSASIVDHFKDRIPSNNLPLFKNL
LKEIAKLERDPNGSLWVLKQEYRQ
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagaggaggatagagtcttgttgagtagtttaggggtcacgtctgcatatcct
gaggatatcgaacaagatattctagccaaggcggaaaacaatgctggggatgggagtgaa
gtaggagggactactgaggaggaacctcctgataagtcggaaagcaatgacccatctttg
tcagccaaccaagcgaaactcttgaataaattgagggctgtggaatttgaaatagatgct
gttgcatctaccgttgaagagcggagagatgttgcctgtggtgatcatcaagctgatcat
gatgatgacgatagcacggagagaggaaatagagaggatgatgaaagtgttatgcagttt
tcttcacgtgatttgacccttcagcatgccctagctactgataggttaaagagcctaaag
aaaactaaggctcaacttgagaaagaactgtctggtttgctcaaagaaagttcgtctgag
ggcattaagaatgacaagctgataaaggacctggtgaaggaagaacctagactgaagaga
aagtcaaaagaaatccaaaaccctagcaaaaataaagaaaagcggaagaaaacagtttcc
tttaatgaagatgttgattttgatgcagtgctggatgcagcatctgtcggatttgtggaa
acggaaagggatgaattggtacggaagggaattttaactccttttcataagcttaagggc
tttgagcgccgtcttcaacagcctgggacatctaatgagcacattgtgcctaatgaagaa
gatgagaatgacgatcttgtttctgctagtgtcgctagagctgcaaagtcaatatcagaa
gctgcacaagctcgcccatcaaccaaactacttgattcggaagctttgccaaagcttgat
gcacccacctttccttttcaaaggctaaaaaaacctttaagatttcctcaggctacagtg
gtcaaggagactaaaggttcaaaacagaaaaggaggagacctttgcccgacaagaaatgg
agaaagcgaatctcttatgaggaaagggatatagaggagggagaagatgtgagggataac
ttgacttcccatgatgaggaagaaaaccaagaggagtcggaggatgtggatgataatgac
cctccttatgtgacacttgaaggtgggctaaaaatccctgaaaccatttttagcaaactt
tttgactatcaaaaagtgggagtgcagtggttgtgggaactgcattgccaaagagcaggt
gggattataggggatgaaatgggtcttggcaagactgtccaggtcttgtcttttcttggg
gcattgcactttagtaaaatgtatgaaccaagcattattgtctgccctgtaacactcttg
cgtcaatggaaaagggaggcacgaagatggtattcaagatttcatgttgagatactgcat
gattctgctcaggatcctgattataagaagaagcaagccaaatcatctggagaaagtgat
tatgaaagtgaaggttcacttgacagcgattatgagggaaacttttcttctaaaagcagc
aaaaaatgggattctttgataaatagagttttgaggtcaagatctgggttgctaattaca
acttatgagcaacttcgactgctaggtgaaaagttgcttgacatagaatggggttatgca
gtcttggatgaaggacatcgaatccggaatccaaatgctgaagtcactctggtttgcaaa
cagcttcagacggttcaccgtataataatgactggtgcaccaattcagaacaagcttact
gaactgtggtcattatttgattttgttttccctggaaagttgggtgtcttacctgtattt
gaggcagagtttgcagtccctatatctgttggtggatatgccaatgcttcaccattacaa
gtatccacagcctacaggtgtgctgttgtcctccgtgacttgatcatgccttatcttctc
cggcgcatgaaggctgatgtgaatgcccaactgccaaaaaagacggaacatgtacttttt
tgtagccttactgctgaacaaagatctgtgtatagagcatttctggctagctccgaggtg
gaacaaatattggatggcagtagaaattctctttatgggattgatgtgatgcgcaaaata
tgcaaccatcctgatcttcttgaaagagagcattcctgccagaatccagactatggaaat
cctgaacgcagtggaaaaatgaaagttgttgcccaagtgcttaaggtttggaaggagcag
agccatcgtgttcttttgtttgctcaaacacagcaaatgcttgacattcttgaaaacttc
ttaattagtagtgattatgactaccgaagaatggatggacatacccctgtaaaacagaga
atggccttaatagatgaattcaataactctgatgatatattcattttcattctgacaaca
aaggttggtggtttaggaacaaatttaacaggtgcagacagggtgatcatctttgaccct
gattggaacccatcaacggacatgcaggccagggagcgcgcttggcgaattggccagaaa
agagatgtaactgtatatagattgattactcgtggaacaattgaggagaaggtgtaccat
cggcaaatttacaaacattttcttaccaataagatattgaagaacccccagcagagaagg
ttctttaaagctcgagatatgaaggatcttttcaccctgaaagataatggggagagtggg
tcaactgaaacatctaatattttcagccagttgtctgaagatgtaaatattataggtgct
cagaaagatacgcagcataagcaggaacattcgaaagctgctgttcctcaagctggtaat
gctgacagaggaaaaggaaattgctcaaacactgctctttcaattaggaaaggaaaagaa
aaagatgatcatagtgatggtgaagtagatgaagaaaaaaacattttgaggagccttttt
gatgcccacgggatccatagtgccgtgaaccatgatgccatcatgaacgccaatgatgaa
gagaagatgaggcttgaggaacaggcttcacaggtggcacaaagagcagcagaagcacta
cgccagtcacgattgcttcgaagccatgatagtatttctattccaacttggactgggaaa
tcaggagccgcaggtgcaccatcagcagttggtaagaaatttggctcaactttgaactct
cagttactaaaacccgcaggtgagtcatctagcagtggcatggcagctggggcagccgct
gggaaggcgttatcttcagcagaattgctagctagaattcgtgggaaccaagaacaagca
gttggtgctgggcttgaacatcagtttggattggcttcaagttcttctcacagggctaga
tctgtggttaacgggacttctaggtcatcttctaatatatcaagtgtgcagcctgaagtt
ttgatacgtcagatatgtacatttatacaacaaaggggtggaagcactgattcagccagc
attgtggatcacttcaaggacagaataccctcaaacaatctgcctttgtttaagaatcta
ttaaaggaaattgctaaactagagagggatccaaatggatctctttgggttctaaagcaa
gagtatcgacaatag
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integrated database retrieval system
