Durio zibethinus (durian): 111305654
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Entry
111305654 CDS
T05242
Name
(RefSeq) protein PAT1 homolog 1-like isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111305654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111305654
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111305654
mRNA degradation factors
5'-3' decay
Decapping complex
111305654
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
111305654
NCBI-ProteinID:
XP_022759102
UniProt:
A0A6P6A2V1
LinkDB
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Position
Unknown
AA seq
720 aa
AA seq
DB search
MDDLASTFAKLNRVVTGPRNPGVIGDRSGSFSRESSSATDWAQDGEYVNWMDQHSFDAED
SQEVKRWSSQPQPSSAHSSESKPLYRASSYPQQQPQPHHFSSEPVIGPKSTFTSFPPPGS
KCQQSSPGHLKIPALTCGSQPPFSAASLSPMSNSSLHLAGLSHGLHYGANMSQLTSPGLS
FSSRSQNHWVNHSALLHGDHAGLLHSMLQQQIPHQNGLMSPQLMSPRQQLQQQRLHHSVQ
PSLAHFAALQSQLYNSHPSSHKMMLGLTDLRDQRTRSSQRNRQSIRFSQQSSDTGSQKSE
SGLVQFRSKYMTAEEIESILKMQHAATHNNDPYVDDYYHQACLAKRSSGSRAKHHFCPSH
MKELHSRSRNSGEQHLHLHVDALGKVRRPRPLLEVDPPLGSGDGGSEQNTERPLEQEPML
AARITIEDGLCLLLDVDDIDRLIQFGQPQDGGAQLRRRRQILLEGLAASLQLVDPLSKGG
HAVSCAPKDDIVFLRLVSLAKGRKLLTRFLQLLIPGSELTRIVCMAIFRHLRFLFGGLSS
DLEAAETTTNLAKTVSMCVNGMDLRALSACLVAVVCSSEQPPLRPLGSPAGDGASVILKS
VLERATQLLSHPSGNCSMPNYALWRASFDEFFALLTKYCVSKYETIMHSIHNESPPTTEV
IGSEAIRREMPCELLRASLPHTNEAQRKLLMDFSQRSMPMNGSNSPAGSSSQINSESVRG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctggctagtacttttgcaaagttgaatagggttgtcacaggaccaagaaat
ccaggagttattggtgatagatctggatctttttcaagggaaagctcatctgctactgac
tgggctcaagatggggagtatgtaaactggatggatcagcactcatttgatgcagaagat
tctcaagaagtcaagagatggtcctcacagccacaaccttcttctgctcatagttcagaa
tcaaagcctttgtatagagcttcctcatatccccagcagcaaccacagccacatcacttc
tcaagtgaaccagttattggacccaaatcaaccttcacatctttccctcctcctggtagc
aaatgccaacagtcttcacctggccacctaaaaattcctgctcttacttgtggatctcag
ccacccttctctgcagcaagcctctctccaatgtctaactccagtcttcatttggctggt
ctgtctcatggattgcattatggtgctaatatgtcccagttaacatctcctggcctatct
tttagtagcaggtcgcaaaatcactgggttaaccactctgctctattacatggagatcat
gctggacttttgcatagtatgttgcaacagcaaatacctcatcaaaatggcctaatgtcc
cctcagttaatgtcaccaagacaacagttgcaacagcagagactgcaccattcagttcag
ccatctttggcacattttgctgcattgcaatctcagctgtataattcccatccttcatca
cataaaatgatgcttggactgactgatcttagggatcaacgaactagatcatcacaaaga
aacaggcagagcatacgtttttctcagcaaagctctgatactggtagccagaaaagtgag
agtgggttggtgcaattcagatccaagtatatgactgctgaagagatagagagtattctt
aagatgcagcatgctgcaacgcataataatgatccttatgtagatgattattaccaccaa
gcttgtcttgccaaaagatcttctggatccagggctaaacatcatttttgcccatctcac
atgaaggaattacattctcgatcccgtaacagcggagagcagcatttgcatctccatgtt
gatgcacttgggaaggtccgtagacctcgtcctctgcttgaagttgatcctcccttgggt
tctggtgatggaggttctgaacagaacactgagaggcctctggaacaggaacctatgctt
gcagctagaatcaccattgaagatggtctctgtcttcttcttgatgtagatgatattgac
cgtctcatacaatttggtcaaccccaagatggtggggctcagctcagacggaggcggcag
atcctgcttgaaggtttggcggcatcacttcagcttgttgatccacttagcaaaggtggg
catgcagttagctgtgctcccaaagatgacattgtgttcctaagattagtctctcttgca
aagggccgtaagctactaaccagattccttcagcttctcatccctggaagtgagcttact
cgaatagtatgcatggccattttccgtcacttgagattcttgtttggtggtctttcttct
gatctggaagcagccgagacaactactaatcttgcaaagactgtttctatgtgtgttaat
ggcatggatcttcgtgctcttagtgcttgccttgttgcagttgtttgttcttcagagcag
ccaccacttaggccccttggaagccctgctggggatggtgcttcggttattttaaaatca
gttcttgaaagggccactcaacttttaagtcatccatctggaaattgcagcatgcctaat
tatgctttgtggagggcatcatttgatgaatttttcgcacttcttaccaagtattgtgtg
agtaaatatgagactataatgcattcaatacataacgagtctccgccaaccacagaagta
ataggttcagaagctataaggcgtgaaatgccttgtgaacttctacgtgctagtcttcct
cacacaaatgaagcccagagaaagcttttgatggacttttctcagcgttctatgcccatg
aatggatccaattcgcctgctggcagtagtagccaaataaactctgaatctgtgaggggt
taa
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