KEGG   Durio zibethinus (durian): 111306753
Entry
111306753         CDS       T05242                                 
Name
(RefSeq) pre-mRNA-processing factor 19 homolog 1-like isoform X1
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03040  Spliceosome
dzi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111306753
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111306753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dzi03041]
    111306753
   04121 Ubiquitin system [BR:dzi04121]
    111306753
   03400 DNA repair and recombination proteins [BR:dzi03400]
    111306753
Enzymes [BR:dzi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111306753
Spliceosome [BR:dzi03041]
 Complex B
  Other components
   Prp19 complex
    111306753
 Complex C
   Prp19-CDC5 complex
    111306753
Ubiquitin system [BR:dzi04121]
 Ubiquitin ligases (E3)
  U-box type E3
   111306753
DNA repair and recombination proteins [BR:dzi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    111306753
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_SPT8 NBCH_WD40 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR41 PROPPIN Beta-prop_Aladin U-box WDR54 zf-Nse WD40_like Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 PAS_11 V_ATPase_I_N PUMA_CC
Other DBs
NCBI-GeneID: 111306753
NCBI-ProteinID: XP_022760346
UniProt: A0A6P6A6I0
LinkDB
Position
Unknown
AA seq 523 aa
MNCSISGEVPEEPVVSMKSGLLYEKRLIERHISDYGKCPVTGEPLTMDDIVPVKTGKIVK
PRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARSLLAEAERQAPFPASAVTASVSSLSNGKRAAENEDMGPGAKRMRPGVSDSVIAE
LTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDINLSKGIVAT
GGIDSSAVLFDRTSGEILSTLTGHSKKVTSVKFVAQNDVFLSGSADKTVRIWQGSEDGNY
DCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGLCLTQVEDPSNSMGYTSA
AFHPDGLILGTGTTGATVRIWDVKSRGNVANFDGHTGAVTAISFSENGYFLATAAHDGVK
LWDLRKLKNFRSFELYDENTPTNSVDFDHSGSYLAIAGSDVRVYQVGSVKAEWNCIKTLP
DLSGTGRATCVKFGPDARYLAVGSMDRNLRVFGLPEDDASTDS
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgaactgttcaatctccggcgaggtgccggaagagcccgtcgtctccatgaaatccggc
ttgctttacgagaaacgcttaattgagcggcacatttcggattatgggaagtgtcctgtt
acaggggaaccacttactatggacgacattgtcccagtcaaaactggcaagattgtgaag
cccagatctttaacagcggctagcattcctgggatgcttggaatgtttcagaatgaatgg
gatgctttaatgctatccaattttgctttggagcagcagctacatacagctaggcaagag
ctaagtcatgcactctaccagcatgatgctgcctgccgtgtgattgcaagacttaaaaag
gaaagggatgaagccaggtcattacttgcagaggctgagaggcaggcaccttttcctgca
tcggcagttactgcaagtgtttcttctctaagcaatggaaagcgagctgcagagaatgaa
gatatgggccctggtgcaaagagaatgcgccctggggtttctgatagtgttattgctgag
ttaacagaatgtaatgcagctctgtcacaacagcgtaaaaagcgccagatacctccaaca
ttggctcccattgatgctttggagaggtatacccaactttctagtcatccccttcacaag
acaaacaaaccagggatcacttcgattgatatcaatctttcaaagggcattgtcgcgaca
ggtgggattgattctagtgcagtactttttgatcgaacatctggagagattttatcaaca
ctcactggtcactctaagaaggttacaagtgtaaaatttgtggctcagaatgatgtattt
ttaagtggttcagcagataagactgttcgcatttggcaagggtctgaagatggaaactat
gattgcagacatattttgaaagatcatacagctgaggttcaagctgtcacagtccatgcc
acaaataactactttgtaactgcttcgcttgatacaacatggtgcttttatgatctttcc
tctggcctatgcttgacacaggttgaagacccttcaaattccatgggctatacatctgct
gcttttcatcccgacggtctcatccttggaacaggcaccacaggagctactgttagaatt
tgggatgtgaagagtcggggaaatgttgccaactttgatggacacactggggcagtaaca
gccatatctttctcggaaaatggttacttcctagctactgctgcacatgatggtgttaag
ttgtgggatctgcgcaaattgaagaacttccgttcatttgaattatatgatgaaaacacg
ccaactaactctgtggatttcgaccatagcgggagttaccttgcaattgcaggctcagat
gtacgagtttaccaagttggcagcgtcaaagcagaatggaattgcatcaaaactttacct
gatttgtctggcacaggtagagcaacttgtgtcaaattcggtccagacgcaaggtatttg
gcagtgggatcaatggatcgcaaccttcgcgtatttggccttcctgaagatgatgcttca
acagattcataa

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