Durio zibethinus (durian): 111306811
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Entry
111306811 CDS
T05242
Name
(RefSeq) DNA repair helicase XPB1-like isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03022
Basal transcription factors
dzi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111306811
09124 Replication and repair
03420 Nucleotide excision repair
111306811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111306811
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111306811
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111306811
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111306811
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111306811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
111306811
NCBI-ProteinID:
XP_022760492
UniProt:
A0A6P6A6Q4
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MGHGERGRPSKKLKFAVKDDHRSSAVEDEYSFFPDEGDDDSRDGEKEGKKRDFSKLELKL
DHDNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV
GLETETIIAVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYLIESPFPEVLKKLL
RDEVIARARIVSESAHGSDGFTISKTAGEIETGHDGLLNEAELAAAAEEKETHAFEIDPS
QVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRA
RSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFT
SDSKERFRGSAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFR
KVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC
PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQERGDKIIVFADNLFALTE
YAMKLRKPMIYGATSHLERTKILQAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHA
GSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG
YSFKVITSLPPPDAGADLSYFHLDDQLALLGKVLAAGDDAVGLEQLEEDADDIALHKARR
SMGSMSAMSGANGMVYMEYSTGKHKLIGQGQNKSKPKDPSKRHHLFRKRYG
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggacatggcgaaaggggtcgacctagcaagaagcttaaatttgctgtcaaggatgat
cacaggagctcagctgttgaagatgaatattccttttttccggatgaaggcgatgacgat
tctcgtgatggtgaaaaagaaggaaagaagagagattttagcaaattagaactgaaactc
gatcatgataatcggccattatgggcttgtgctgatgggcgtatattcttggagacattc
tctcctttatacaagcaagcttacgattttctcattgctatagctgaacctgtttgcagg
ccagagtcaatgcacgagtacaatctaacaccgcattccttgtatgctgcggtatctgtg
ggtttggaaacggaaactattatcgctgtgttgaataaattgtccaagactaagcttcct
aaagaaatgattgatttcatacatgcttctactgctaattatggcaaagtgaagcttgtg
cttaagaagaatcgttaccttattgaatccccatttccggaggtactaaagaaactgctt
cgagatgaggttatagctcgagcaaggattgtttctgagagtgcacatggaagtgatgga
tttacaatcagcaaaactgcgggtgaaattgaaactggccatgatggtttgcttaatgaa
gcagaactggcagctgctgctgaagagaaagaaacccacgcatttgaaattgacccttct
caggttgaaaatgtaaagcaacgatgcttgccaaatgctttaaattatccaatgttagag
gagtatgatttcagaaatgacactgtcaatcctgaccttgacatggaactgaagcctcat
gcacagccacgaccataccaggaaaagagtcttagtaaaatgtttggaaatggtagagca
agatctggcattattgtgctaccttgtggtgctggaaagtctctagttggtgtttctgca
gcaagccgaataaagaagagttgtctttgtttggcaacaaatgcagtttcagtggatcaa
tgggcctttcagtttaagctctggtcaaccatacgggatgatcaaatttgtcgttttaca
tctgacagcaaagagagattccgtggcagtgctggagtggttgtgacaacatataatatg
gttgcttttggtggtaagcggtctgaagaatctgaaaagattattgaagagataagaaac
agagaatggggactgctgctcatggatgaggtgcatgttgtccctgctcacatgtttagg
aaagtcatcagtctcaccaaatcccactgcaaactggggcttactgccacacttgtgaga
gaggatgaaagaattacagatttgaactttcttattggtcccaaattatatgaagcaaat
tggctggatctagtaaaaggagggtttatagcaaatgtacagtgtgctgaagtatggtgc
ccgatgacaaaggagttttttgctgaatatttgaagaaagaaaattccaagaagaaacag
gcactttatgtgatgaatcctaataagttcagggcgtgtgaatttctcatacggttccat
gaacaggagcgtggtgataagataattgtctttgccgacaatctttttgcactgacagag
tatgcaatgaaactgcgcaagcctatgatctatggtgctaccagccatctcgagaggaca
aaaattctccaggcattcaaaactagtcgtgatgttaacactattttcctctcaaaggtc
ggtgataattcaatagatattcctgaggcaaatgtgataattcagatttcatcacatgct
ggttcgagacgtcaagaagcccagcgattgggacgtattcttagggcaaagggtaaactt
gaagataggatggcaggtggtaaagaggagtataatgcttttttctattcccttgtctct
acggatacacaggaaatgtactactcaactaaaaggcagcagtttctaattgatcaaggt
tatagctttaaggtgataacaagcttgcctcctcctgatgctggtgctgacttgagttac
ttccatcttgacgaccaattggcccttctaggaaaggtcttggctgctggtgatgatgca
gttggtttagagcagttagaagaagacgcggatgatatagcccttcacaaagcccgccgt
tctatgggatccatgagtgcaatgtcaggtgcaaatggaatggtctacatggaatacagc
actggaaagcataaacttattgggcaggggcagaataagagtaagcctaaggatccatcc
aagcggcatcatttgttcaggaaacgctatggttga
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