Durio zibethinus (durian): 111307338
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Entry
111307338 CDS
T05242
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
dzi
Durio zibethinus (durian)
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111307338
03036 Chromosome and associated proteins [BR:
dzi03036
]
111307338
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
111307338
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111307338
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
111307338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
UvrD-helicase
AAA_22
Mov-10_helical
PhoH
Helicase_RecD
DEAD
ATPase_2
AAA_16
AAA
SLFN-g3_helicase
AroM
AAA_5
AAA_7
AAA_24
Motif
Other DBs
NCBI-GeneID:
111307338
NCBI-ProteinID:
XP_022761080
UniProt:
A0A6P6A8F5
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MNFVSNQCLPFWLVMGTTGHKLDDEYSVIGDKREIDFIDYEYDKSVCDYNQLEEGRVIIS
SPFPFLDGKPQSVVMGETAFDLITIKNTTSEPIDLWTKIYASTPENSFTLSLMKPPSANS
DGNTSQGFIEFFDLEDRMIQPGETLSIWLSCKAKEIGLHTTILHFDVEADRLERVAFLLV
EDKIAQSLASKKPYSRVQRRKQFSVDAFVTGSRPARATDRSVKNRLPLYAIPKDIRELFE
SKQTPDAIKAGLSRDNYASYFKHLLILEELQLEEDMRAYNMEDVNMRKKGKFLSLQVPGL
AERRPSLVHGDHIFAKLACEDASETARVYQGFVHRVEADEVYLKFATEFHMFHIDENLYN
VQFTYNRINMRRQYQAIDAAERLELNLLFPSESPKKRLIKTTPLVPISCTLNEEQMCSIE
MILGCKGGPPYVIYGPPGTGKTMTLVEAILQLYKTQKCSRILVCAPSNSAADFILDRLLN
EESVELKENEIFRLNAAARPYNDVNPDILRFCFFDEFVFKCPPLCALTCYRIIISTYMSA
SLLYVENVSNGHFSHIFLDEAGQASEPESMIPIANLCQRETVAVLAGDPMQLGPVIYSRE
TETFGLGKSYLERLFECEFYSVGDENYVTKLVRNYRCDPEILYLPSLLFYNGELIPCKDE
KLSFLKSVKFLPNKEFPVFFFGIQGCDEREGSNPSWFNRIEASKVVEIVTSLTASGIVSH
EDIGVITPYRQQVLKLNKAFENLEIPDIKVGSVEQFQGQERKVIIISTVRSTVKHNEFDR
AHCLGFLSNPRRFNVAITRAIALLVIVGNPHIIAKDPYWSKLIWRCADNNSYLGCALPER
QEYIDEVSMQDDCWNQDESITAESGYGEDTTPTETIKPLSDEVEWV
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgtttcaaaccagtgtctgcctttctggttagtgatgggaacaacaggtcac
aagttggatgatgaatattccgtcattggagacaaaagagaaattgatttcattgattat
gagtatgataaatctgtttgtgattacaatcaacttgaggagggccgtgtcataatttct
tcaccatttccatttttagatgggaagcctcaatctgtagttatgggagaaactgccttt
gatttgatcactatcaaaaacaccactagtgaaccaattgatttgtggacaaaaatttat
gcatcaacacctgagaattctttcactctttctttgatgaaacctccatcagcaaattct
gatggaaatacaagccaaggtttcattgaattttttgatttagaggacagaatgatacag
cctggagagactttaagtatttggctgtcttgcaaagcaaaggaaattggcttgcacact
acaatactgcattttgatgtggaggctgatagattagaaagagtggcctttctcttggtc
gaagataagatcgcacaatcgttggcatctaaaaagccatattctagagttcagagaagg
aagcaattttctgtggatgcatttgtcactggatcacgcccagcaagggcaacggatcga
agtgttaaaaacaggcttcctttgtatgccattccaaaggatattagagaactgtttgag
agtaagcagactcctgatgctattaaagcaggtctatcaagagataattatgcatcttac
ttcaaacatctcttaatcttggaagagttacaactagaggaagacatgagggcctataac
atggaggatgttaacatgaggaagaagggaaagtttttatcacttcaggtcccaggactt
gctgaaagaaggccttcacttgtccatggagaccatatttttgctaagcttgcatgtgaa
gatgcaagtgaaacagctcgagtttatcagggttttgttcatcgggtagaagctgatgaa
gtgtatttgaagtttgcaacagaatttcatatgttccacatagatgagaatctttataac
gttcagtttacgtataaccgaatcaatatgcgtaggcaataccaggccattgatgctgca
gaacgcttagagttaaatctcctttttccatctgagtccccgaaaaagaggctgattaaa
accactccactagtgcccatatcttgtacacttaatgaggaacagatgtgctcaattgag
atgatccttggctgcaaaggaggacccccttatgtgatttatgggcctccaggtacaggg
aagaccatgacattagtggaggcaatccttcagctctacaaaactcaaaagtgttctcga
attcttgtgtgtgcaccttcaaatagtgcagcagattttatactagatagactcctcaat
gaggagtctgttgagcttaaagagaatgaaatatttagactaaatgcagctgcgcgtcca
tacaatgatgtcaaccctgatattcttaggttttgcttctttgatgagtttgtcttcaaa
tgtcctccactttgtgctctcacctgctacagaatcatcatatcaacttacatgagtgct
tcccttctgtatgtagaaaatgttagtaatggtcatttctctcatattttcttggatgaa
gctggtcaagcttcagagccagaaagcatgatccctatagccaacctttgccaaagagag
actgttgctgtgcttgctggagacccaatgcaattaggtccagttatatactcaagagaa
acggagactttcggactgggaaaatcatacttagaaaggctatttgaatgcgagttttat
tctgtaggggatgaaaattatgtaacaaaattggttagaaactatcgttgtgatccagag
attctatatctcccttcattgcttttctacaacggtgaattaatcccttgcaaagatgaa
aaactttcattcttgaaatcagtgaagtttcttcctaataaggagtttcctgtctttttc
tttggtatccaaggctgtgatgagagggaaggtagtaatccgtcatggttcaatcggatt
gaagccagcaaggttgtagagattgtcacgagtctgacagcaagtgggattgtgagccat
gaggatattggggtcataaccccctacaggcagcaagttctcaaactaaacaaggccttt
gagaatcttgaaatacctgatatcaaggttggaagcgttgaacaatttcaaggacaagaa
cgaaaagttattatcatatctactgtccgatcaacagtcaaacacaatgaatttgacaga
gcccactgtttgggatttttgagcaatccgagaaggtttaatgttgccattacccgtgca
atagctttgcttgttattgttggaaatccgcacataattgccaaggatccatactggagc
aagcttatatggcgttgtgcagataacaactcttatctgggttgtgctctgcctgaaagg
caagagtatattgatgaagtttcaatgcaggatgattgctggaaccaggatgaaagtatc
actgctgaaagtggatatggtgaagacaccacgccaactgaaactatcaaacctctatca
gatgaagttgagtgggtctga
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