Durio zibethinus (durian): 111307833
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Entry
111307833 CDS
T05242
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03440
Homologous recombination
dzi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111307833
03450 Non-homologous end-joining
111307833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dzi03032
]
111307833
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111307833
DNA replication proteins [BR:
dzi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
111307833
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
111307833
BRCA1-C complex
111307833
NHEJ (non-homologous end-joining)
MRX complex
111307833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
Rad50_zn_hook
AAA_15
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
111307833
NCBI-ProteinID:
XP_022761844
UniProt:
A0A6P6AA98
LinkDB
All DBs
Position
Unknown
AA seq
1316 aa
AA seq
DB search
MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI
FSATRYTKALEVIKKLHKDQAQEIKAYKLKLAHLQTLKDAAYKLRESIAQDQEKTESLKS
QIQELGKSIDDLDAKIHNAEATLKDLRKIEDQRSTKTAERSTLFKEQQRQYAALAEENED
SDEELLEWKTKFDERIMLLDNKIQKLESNQQDLQNESSAYRSKLDAYIVEIGKLQRDAEY
LVVSKKERDSAIQQLYARLNLGSIPNSPFSDEVALNLTNQIEERLMELDKDLDEKKKSNE
MRLKTAWDCYMGANDRWNSSEAQKKAKLEVKTSILKRLEEKKIDRDSLELQISDVNLSLI
DEREKNMQIEMDRKKKQFDEQSFDANIQQKQHEVYAIDQKIKVLSLERDIIAGDAEERMM
LSIKKRELEYKKKQHKRIIDEYKDRIRGVLKGRVPPDKDVKREITQALRATQMEYDELST
KSSEAEKEVNMLQMKIDEINNNLSKHQKDMDSRKRFLETRLNSLDQQSFTIDFYPKVLET
AKEKKDIHKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAAS
SAEHMKVLAVESSNAESHFQQLDKLRMVYEEYVKTGNETIPLAKKTLHELTEELNQKSQA
HYDVLGVLAQIKTDKDSIETLVEPVETADRLFQEIQGLQAEVEGLEYKFDIRGQGTRTVE
EIQLELNSLQNTRDVLHNEVENLRVEQRYMEKDLSSIQLRWHGIREKKIEVANTLREFKK
VEEELEHLAEEKRQLDLEEKHLAESLGSLFKEKEKLLNDYECLKVKLTQEYEQQHKLRSS
YQHEAEALSQTSNKIKGYYDLKKGEKLKELLEQQSVMKSQLLSCEARKQEILAELNKSKD
LMRNQDQLRRNIEDNLNYRKTKAEVDVLTREIDLLQDRIMEIGGIFKFEGELRKFSEDRE
RLLSELNRCRGTMSVYQSNISKNKAELKQAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY
NALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT
GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAERYYRVTKDDHQHSIIEAQEIFD
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtggataagatgttgataaaaggaatccggagtttcgacccggaaaacaaa
aacgttatcactttctttaaacccttaaccctaatcgttggacccaatggtgctggcaaa
accacaattatagagtgcttgaagctttcttgcactggggagttgcctccaaatgcaagg
tctggtcatagtttcattcatgaccccaaggttgcaggggagacggagacaaaggggcaa
attaagctgcggttcaagacagcggcgggaaaagatgtggtatgtataaggtcattccaa
ttgacccaaaaggcatcaaagatggagtataaagcaatcgagagtgtgcttcaaaccata
aatcctcacactggagagaaagtttgcctcagctatagatgtgctgacatggaccgagaa
ataccagctttgatgggagtctcaaaagctattctggaaaatgtgatatttgtacaccaa
gatgaggccaattggcctttacaagatccttcgactttaaaaaagaagtttgatgatatc
ttctctgctaccagatatacaaaagccttggaggtcataaaaaagcttcacaaagatcaa
gctcaagagataaaggcttataagctaaaactggcgcacttgcagaccttgaaagatgct
gcatataagcttcgagaaagcattgctcaagatcaagaaaaaacagaatctttgaaaagc
caaatacaggaattgggaaaaagcattgatgacctggatgctaagattcataatgctgaa
gcaacattgaaagatctgcgaaagatagaggaccagagatcaacaaagactgctgaaagg
agcactttgttcaaggagcagcagagacagtatgcagctcttgctgaggaaaatgaagat
tctgatgaagaattgttggaatggaaaaccaagtttgacgaaaggattatgttattggat
aataaaattcagaaattggagagtaaccagcaggacttgcaaaatgagagttctgcttat
aggagtaaattagatgcatatattgtggagattggcaagcttcaaagggatgcggagtat
cttgtggtgtcaaaaaaagaaagagattctgccattcaacaattatatgcacggctcaat
ttaggttctatcccaaatagcccctttagcgatgaagttgctctgaatctcacaaatcaa
atagaagagaggttgatggagcttgataaagatttggacgagaaaaagaaatcaaatgaa
atgaggctaaagactgcatgggattgctacatgggtgcaaatgaccgttggaacagtagt
gaggctcaaaagaaggctaaattagaagtcaagacttctattttgaaacgtttggaagag
aagaaaattgatcgtgattcacttgaacttcaaatttcggatgtcaatctttctctcatt
gatgaaagagaaaagaatatgcaaattgagatggacagaaagaaaaagcaatttgatgag
caaagctttgatgcaaacatacaacaaaagcagcatgaggtatacgccatagatcaaaag
attaaggtccttagtctagagagagacatcattgctggtgatgctgaggagagaatgatg
ctatctataaaaaagagagagttggagtacaagaagaaacaacacaaaaggataattgat
gagtacaaggacaggattagaggagtactaaaagggagggttcctcctgacaaagatgtg
aaaagggaaattacccaagctttaagggctactcaaatggagtatgatgaattaagcacg
aaatccagtgaagccgagaaggaagtaaatatgttgcagatgaaaatagatgaaattaat
aataacctatccaaacatcagaaagatatggactcaaggaagcgatttcttgaaaccaga
ctaaattctttggatcaacaatcttttaccatcgatttctatcccaaagtcttggagact
gctaaggagaaaaaggatatccataaaagcaaatacaacattgctgatggcatgaggcaa
atgtttgatccatttgaaagagttgcccgtgctcatcatgtttgcccatgctgtgagcga
cctttttctgctgaagaggaagatgaatttgttaagaagcaaagagtcaaggcagcaagt
tcagctgaacatatgaaagtgttggcagtggaatcatcaaatgctgagtctcactttcag
cagttggacaagcttcgtatggtttatgaggaatatgttaaaactggaaacgagacaatt
cctcttgctaagaaaactttgcatgaacttacagaagagctcaatcaaaagtctcaagcc
cattatgatgtgttaggtgttttagcccaaataaagactgataaggattccattgagacc
ttggtggaacctgttgaaactgctgacaggctcttccaagaaattcagggtttgcaagca
gaagttgaaggtttggaatataagtttgatattagagggcaaggtactagaactgtggaa
gagatccaattggagctaaacagtttgcaaaacacaagggacgttttacataatgaagtg
gagaatttaagggtggaacagaggtacatggaaaaggacttgtcaagcattcaattgcgg
tggcatggtataagggagaaaaaaattgaggtagccaacacattgcgtgagtttaaaaag
gtggaagaagagttagagcacttagctgaggagaaacgtcaacttgatcttgaggagaag
catttagcagagtctcttggttctttattcaaggagaaggaaaaattgctgaatgactat
gaatgtttgaaagtaaaactcactcaggaatatgagcagcagcataaacttagaagctca
tatcaacatgaagctgaagcactatctcaaactagcaataagattaaagggtattatgat
ttaaagaaaggggagaaattaaaggaactgctagaacagcaatctgtgatgaaatctcaa
cttctcagctgtgaagctaggaaacaggaaattttggctgagctaaacaaaagtaaagac
ttgatgcggaatcaagatcaattaagacgtaacattgaggataacttgaattacaggaaa
acaaaagctgaagtagatgtacttactcgtgaaattgatttactgcaagacagaataatg
gagattggtggtattttcaaatttgaaggtgaactgcgaaaattctcggaagacagggag
agacttctttcagagcttaacagatgccgaggaacaatgtctgtttaccagagtaatatt
tcaaagaataaagccgaacttaaacaagcacaatacaaggacattgacaagcggtacttt
gatcagctaatccagcttaagacaactgagatggcaaacaaggacctggatagatactac
aatgcacttgacaaagcactcatgcgctttcattcaatgaaaatggaggaaataaacaaa
attataagagaattgtggcagcaaacatacaggggacaagatatagattatattagcatt
cattcagattctgaaggtgctggaactcgctcttacagctacaaggttctcatgcaaact
ggtgatgctgagcttgaaatgagaggacgatgtagtgcaggtcagaaggtccttgcttct
cttatcatacggttagctttagctgagacattttgcctcaactgtggaatcctagcacta
gatgaaccaaccacaaatttggatggcccaaatgctgagagtcttgcagcagctctcctt
agaattatggaggacagaaagggccaggagaattttcagctgatagttattactcatgat
gaacgattcgctcaattgatcggtcaacggcaacatgcagagagatattaccgggtcacc
aaagatgaccatcagcatagtataattgaagcccaggagatatttgattga
DBGET
integrated database retrieval system
