Durio zibethinus (durian): 111308159
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Entry
111308159 CDS
T05242
Name
(RefSeq) LOW QUALITY PROTEIN: protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111308159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111308159
04121 Ubiquitin system [BR:
dzi04121
]
111308159
03036 Chromosome and associated proteins [BR:
dzi03036
]
111308159
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111308159
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111308159
Ubiquitin system [BR:
dzi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111308159
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111308159
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111308159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
BRCT
zf-HC5HC2H
BRCT_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_6
zf-C3HC4_3
zf-C3HC4_4
zf-HC5HC2H_2
zf-RING_5
zf-RING_10
RTT107_BRCT_5
zf-rbx1
zf-Nse
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
111308159
NCBI-ProteinID:
XP_022762205
UniProt:
A0A6P6ABD0
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MGDPSYLEKMGRELKCPICLSLLNSAVSLTCNHVFCNACIMKSMKSGSNCPVCKVPYRRR
EVRPAPHMDNLVSIYKSMEIASGFNIFVTQNPPLDKSTDDEKRVENDLNCSERVDNQGAT
KRKGSRVAKSTENSGPIPVKPSFLTNKRVQVPQYPLSETPMMSAKLGSGLVERTEDESKR
TSDIPKENYSPREKGEPIFTPFFWLREEDAEKPSQLTDGDQFVYITPPEVPSFSDMKDSD
DEGFSKEEVHGNTDNVNLFDSEMFEWTQRACSPELLSSPVKMQLEDTDEPALQGSNTVKP
CINNGICMTTRLNTSEEILPNVTSFRTKAANNKTRTHKSREMGRKYRNTAQKKIADRTRS
HVSRGHADPEKGSESFNQNQAADHSSSSSYLAKARKNSKVAVLDHHEAEPIVTYVSDASE
NAETSNQADTNKVNKLPARVSKENSGDEYENLSKGKSCRWIIAQCQKKSCSKSKKQKLSM
AMVDIPEEISTAHNQTNEKMILRSPRFIPVPYDKGAKQFNKVSIKRAREVKSALSLKSEK
NLSGKKKMKVSFSGDTKTWLAEEPQQGNSNFSPQRLSEKVQGSPTVGISDGSTVNKLRLA
NEVALRKFQTVTNKIQCAFCLSTEDSEASGEMFHYYDGRSVPLDHNGGFKVIHSHKNCAE
WAPNVYFENDKAINLEAELCRSRKIKCSCCGLKGAALGCYEKSCRKSFHVPCAKLVSQCR
WDTENFVMLCPLHASSKLPNENPESQESRKRCVLRGSIHHNEVPINNGISVQKKWNPCGS
HKKLVLCCSALSVGEREIISEFEKLSGVTVLKRWDSSVTHIIASIDENGACKRTLKILMG
ILEGKWMLNVNWVKDCIKAMKPVDELRYEITIDVHGIRDGPRHGRLRLQNKQPKLFDGSK
FYMMGDFEPSYRGYLQDLVITAGGAILHRKPISGDQGAPFSTYPVSSTFIIYSVELPDKC
DPTKKHMIISRRQFDAEALASSTGSKAVSNSWVLNSISACKLQSLGE
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgggggatccaagttacctggagaaaatgggcagagagctcaaatgccccatttgcttg
agtctgttgaactctgcggtttcacttacatgcaaccatgtgttctgcaatgcctgtatc
atgaaatcaatgaaatccggttccaattgtccagtttgtaaagtaccctaccggcgtcga
gaggttcgtcctgcgcctcacatggataacttggttagcatttataaaagcatggagatt
gcttcaggtttcaatatttttgtcactcagaacccacctctggataaatcaacagatgat
gagaagcgagttgaaaatgatctcaattgtagtgaaagagtggataatcagggagcaacc
aaaagaaaaggatctagggtggctaaatcaacagaaaactctggtcccatacctgtgaag
ccttcttttctcaccaacaaaagggttcaggtgccacagtatcctctgtcagaaacacct
atgatgtctgcaaaacttggcagtgggttggttgaacgcacggaggatgaatctaaaaga
acttcagatattccaaaggagaattacagtccaagggaaaagggagaaccaatatttaca
ccctttttctggttgagagaggaagatgcagagaagccaagtcagcttactgatggggat
caatttgtgtatataacaccacctgaagttccttctttcagtgatatgaaggattctgat
gatgaaggcttttctaaagaggaggtgcatggaaacactgataatgtgaatctgtttgat
agcgagatgtttgaatggacacagagagcttgttccccagaacttctgtcaagtcctgtt
aaaatgcagcttgaagacactgacgaaccagcattacagggttcaaatacagtcaaaccc
tgtattaataatggcatatgcatgacaactagacttaacacttcagaagagatactgcct
aatgtaacatctttcagaaccaaggctgctaacaacaagaccaggacccataaatccagg
gaaatgggcaggaaatatagaaatactgcccaaaagaagattgctgacagaactagaagt
catgtttccagaggtcatgctgatccagaaaagggatctgaaagttttaatcaaaaccaa
gcagctgatcatagcagcagttcttcatatttggctaaggctaggaaaaatagtaaggtg
gctgttttggatcaccatgaagctgaaccaatagtaacatatgtttctgatgcctctgaa
aatgcagaaacttcaaatcaggctgacacaaataaggttaacaagttgcctgccagagtc
agtaaggaaaacagtggtgatgaatatgagaatttgagtaaaggaaaaagttgcaggtgg
atcattgcccagtgccaaaaaaaatcttgttcaaagtcaaagaaacaaaaactaagtatg
gctatggttgatattcctgaagaaatttcaaccgctcacaatcagacaaatgaaaagatg
attctacgaagtcctcgcttcattcccgtaccttatgacaagggtgccaaacagttcaat
aaagtatcaatcaaacgtgctagggaagtaaagtctgctttgagtttgaaaagtgaaaaa
aacttaagtggtaagaaaaagatgaaagtttcttttagtggtgacacaaaaacttggttg
gctgaagaaccccagcagggaaatagtaatttttccccacagagattaagtgaaaaggtt
caaggtagtcccaccgttggaatttcagatggttcaacagtaaataagcttcgcctagca
aatgaagtggccttgcgcaaatttcagactgttacaaataaaatacaatgcgctttctgt
ctttctacagaagattctgaggcttcaggagagatgtttcattactatgatggcaggtct
gttcctctagatcataatggtggctttaaggtcatacattcacacaagaactgcgctgaa
tgggcccctaatgtttattttgagaatgataaggcaatcaaccttgaagctgaattatgc
agaagccgaaaaataaaatgttcctgttgtggactaaaaggtgcagcgttgggctgttat
gaaaagagttgccgcaagagttttcatgttccttgtgcaaaattagtctcacaatgccgg
tgggatactgagaactttgtaatgttatgccctctccatgcctcttctaagttgcctaat
gaaaatccagaatctcaagaaagcagaaaaagatgtgttttgagaggatcaattcaccac
aacgaagttcctataaacaatggcatcagtgtgcagaagaaatggaatccttgtggatca
cacaaaaaattggtactctgttgctcagctctctcagttggagagagggaaatcatttct
gaatttgagaaattatctggcgttacagtgttgaagagatgggactcaagtgtcacccat
atcattgcatccatagatgaaaatggagcatgcaaaagaacccttaaaattttaatgggt
atcttggaggggaagtggatgctgaatgttaattgggtcaaagattgcattaaagccatg
aaacctgttgatgagttgcgatacgaaattactattgatgttcatggaatcagggatggt
ccacgacatggaaggctaagactccagaacaagcaaccaaagctttttgatgggtccaag
ttctatatgatgggagattttgaaccttcttataggggatacctacaagatcttgtaatt
actgcaggaggtgccattctgcatagaaaacccatttcaggtgatcaaggagccccattc
tctacttaccctgtatcttcaaccttcataatttacagcgttgagttgcctgataagtgt
gatcctaccaagaagcatatgattataagccgccggcaatttgacgcagaagcattggca
agttcaactggttccaaagcagtaagcaattcatgggttttgaactccatttctgcatgc
aaattgcaaagtcttggtgaataa
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