Durio zibethinus (durian): 111308575
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Entry
111308575 CDS
T05242
Name
(RefSeq) regulator of nonsense transcripts UPF3-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03013
Nucleocytoplasmic transport
dzi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111308575
03015 mRNA surveillance pathway
111308575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111308575
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111308575
mRNA cycle factors
P-body specific factors
111308575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
111308575
NCBI-ProteinID:
XP_022762727
UniProt:
A0A6P6ACW4
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MKGALDRTKAVLRHLPPSITESMFVEQVDSAFAGRYNWLSFRPGKSSQKHQSYSRAYIDF
KRPEDVLEFAELFNGHVFVNEKGAQFKAIVEYAPSQCVPKQWSKKDGREGTIFKVFVDEH
LDPEYLEFLEFLAKPVENLPSAEIQLERREAERSGVPKDTPIVTPLMDFVRQKRAAKGAS
RRSPSNVKLRRRGAGSSSGSPSSASSKRGSEKRRGSTAMYVLRDSLKIASVKDKSTYILV
SKRDDQQLSDKPVPLASSVGTEISEEESGVCGITDAGKKKVLLLKGKEKEISNVAGRMLR
QQNVTSPIKTVLGLTPTKQNSRGEGRVIRGILLNKDARQSQSSGVQSEQQIQTSNLEKDR
RPQHSHARLVLKDTNSASDDKVGSNSHGNEKPERRNRNKDRPDRGVWTLHRSDGSYASDE
SLPSSASQSAQIPLDSSEGAFGDYKVDLPNVHGMQVKTVRSGRNSSLDNGSHKHVSRRGA
VADGSSVLSDGKPGKKGSASGYGSHEKQVWVQKLSSGS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaagggggctttggatcgaaccaaggcggttctccgccacttgcctccatccattacg
gagtccatgtttgtcgaacaagtcgatagtgcttttgctggtcgttacaactggctctcc
tttcgtcccgggaagagcagtcagaagcatcagtcttattccagagcgtacattgacttc
aagaggccagaggacgttttggagtttgcagagctttttaatggtcatgtgtttgttaat
gagaagggggctcagtttaaagctattgttgagtatgcgccttcccaatgtgttccaaag
cagtggtctaaaaaggatggtcgtgaagggactatattcaaagtatttgttgatgaacat
ctagatcctgagtatttggagttcctcgaatttcttgcgaagccagttgagaatcttcct
agtgcagagatacaattagagagaagggaggcggaaagatctggtgtaccaaaagatact
cccatagttacacctttgatggattttgttagacagaaaagagctgctaagggtgcatca
cggaggtcaccgtctaatgtgaaactgaggagaagaggagctggttcatctagtggaagt
ccaagttcagcatcatccaaaagaggttctgaaaagagaaggggttctactgcaatgtat
gttctaagggatagcttgaaaattgcaagtgtgaaagacaagtcaacttacattctggtt
tccaaaagggatgatcagcaactttctgataagcctgttcctttagcttcatctgtggga
actgaaatatctgaagaggaaagtggagtttgtggaattactgatgctggtaaaaagaaa
gttctgcttctgaaagggaaagagaaagaaatttctaatgtggctggaagaatgttacgt
caacaaaatgttacatctccaattaaaaccgtacttggtttgactcctaccaaacagaat
tcacgtggtgaaggcagagtgatcagaggcatacttttaaacaaggatgctcgtcaaagt
cagtcttctggggtccagtcagagcagcagattcagacctcaaatttggaaaaggataga
cgacctcagcattctcatgctcggttagttttgaaggatacaaacagtgcttcagatgat
aaggttgggagtaactcgcatggtaatgagaagcctgaaagacgtaacagaaacaaagat
agaccagatcgcggtgtatggacccttcaccgttctgatggatcatatgcaagtgatgag
tccttgccatcatctgcttctcagtctgcacagatacctttagattcttcagaaggggct
tttggtgattataaagttgatttgccaaatgttcatggtatgcaagttaaaactgtcagg
agtggacgtaatagttctttagataatggatcccataaacatgttagtcgtcgtggagca
gttgccgatggatcatctgttttgagtgatgggaaaccagggaaaaaaggcagtgcttct
ggctatggttctcatgagaaacaagtctgggtacagaaattgagttctggttcttag
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