KEGG   Durio zibethinus (durian): 111309107
Entry
111309107         CDS       T05242                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111309107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dzi03041]
    111309107
Spliceosome [BR:dzi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    111309107
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 PRP4 WDR90_beta-prop_4th ANAPC4_WD40 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_DCAF4 WD_LRWD1 Beta-prop_RIG_2nd WD40_RFWD3 eIF2A Beta-prop_SCAP Beta-prop_SPT8 WD40_like
Other DBs
NCBI-GeneID: 111309107
NCBI-ProteinID: XP_022763698
UniProt: A0A6P6AFP9
LinkDB
Position
Unknown
AA seq 572 aa
MEVDDDNKPSTSAAEPSVAVPDGQTAVPTANNTPIQPVQPIVPQVVPLAVVPPIAPIPAI
PPPLVVNPLAPLPVRPPVLKPPVPQNGEVKTSDSDSDYDNDGRATVGEYEISEESRLVRE
RQEKAMQELLMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRMIMAKLD
SEGQLEKLMKAHEEEEAAVSAKVEDIEEDIEYPFYTEGPKELLDARIDIAKYSVLKATVR
VQCARRKRDDPDEDMDAEIDWVLKQAGNLVLDCSEIGDDRPLSGCSFSRDGKLLATCSLS
GVAKLWSMPRVSKVSALKGHTERATDVTFSPVHDHLATASADRTAKLWNTDGSLLKTFEG
HLDRLARIAFHPSGKYLGTTSFDKTWRLWDIDSGVELLLQEGHSRSVYGIAFHQDGSLAA
SCGLDALARVWDLRTGRSILALEGHVKPILGVSFSPNGYHLATGGEDNTCRIWDLRKKKS
LYIIPAHSNLISQVKFEPQEGYYLVTASYDMTAKVWSGRDFKPVKSLPGHEAKVTASDIS
EDGRYIVTVSHDRTIKLWTAGNIEKENDMDLD
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggaagttgatgatgacaacaagccttcaacttcagctgcagaaccttcagttgcagtt
cctgatggccaaaccgcagtgcctacagctaataacactccaattcagcctgttcagcct
attgttccgcaagtggtcccacttgcagttgtaccacctattgctccaatacctgcaatt
cctccacccctggttgtcaacccattggctcctctcccagttcgccctccggtccttaaa
ccacctgtgcctcaaaatggtgaggtgaaaactagtgattcagactctgactatgacaat
gatgggcgagctactgttggtgaatatgagatctcagaagagagcagactagttagagag
cggcaagaaaaggcaatgcaagaacttctgatgaaacgacgtgctgctgcactagctgtg
cctactaatgacatggctgtgcgggctcgacttcgccggcttggtgaacccataactctt
tttggagaaagagagatggaaaggcgggataggctgcggatgattatggcgaagctggat
tctgaggggcaattggagaagttgatgaaagctcatgaggaggaagaggctgcagtttct
gctaaggtggaggacattgaggaagacatcgaatatcccttttatactgaaggtccaaaa
gagcttttggatgctagaattgatattgcaaagtactctgttttaaaggcaactgtgcgt
gttcaatgtgcacggagaaaaagggatgatccagatgaagatatggatgctgaaattgat
tgggtactaaagcaggcagggaatttggttcttgattgcagtgaaattggagatgataga
ccactttcaggttgttctttctcacgtgatggaaaacttcttgccacctgctctttgagt
ggagttgctaagttgtggtcaatgcctagggtaagtaaggtttctgccttaaagggccac
acagaacgtgcaactgatgttacattttctcctgtgcatgatcatttagcaactgcttct
gctgaccgaacagcaaagttgtggaacactgatggatctctcctgaaaacatttgagggc
catttggaccgccttgcacgtattgccttccatccttcagggaagtaccttggtacaact
agctttgataaaacatggagactgtgggacatagacagtggtgtggagttgcttctccaa
gaaggtcatagtaggagcgtctatggaattgccttccatcaagatggatctttagcagca
tcctgtggacttgatgcacttgctcgtgtttgggatcttcgcactgggagaagtattctt
gccttggaaggccatgtcaagcctattctaggtgttagtttttcacccaatgggtatcat
ttagccacaggtggtgaagataatacttgtcggatatgggatttgaggaagaaaaagtcc
ctgtatatcataccagcccactcaaatcttatatcacaagtgaagtttgagcctcaagag
ggatattatttggtcactgcttcttatgacatgactgcaaaggtttggtctggcagagat
tttaagcctgtcaaaagcttaccgggtcatgaagctaaagtcactgcttcagatattagt
gaagatggccgatatatagtgaccgtctctcatgatcgaactataaagctgtggactgcc
ggtaacatcgaaaaggaaaatgacatggatttggactga

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