Durio zibethinus (durian): 111309233
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Entry
111309233 CDS
T05242
Name
(RefSeq) eukaryotic initiation factor 4A-3-like isoform X1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03013
Nucleocytoplasmic transport
dzi03015
mRNA surveillance pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111309233
09122 Translation
03013 Nucleocytoplasmic transport
111309233
03015 mRNA surveillance pathway
111309233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111309233
03041 Spliceosome [BR:
dzi03041
]
111309233
03009 Ribosome biogenesis [BR:
dzi03009
]
111309233
03012 Translation factors [BR:
dzi03012
]
111309233
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111309233
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111309233
mRNA cycle factors
Stress granule specific factors
111309233
Spliceosome [BR:
dzi03041
]
Complex C
Other components
EJC/TREX
111309233
Ribosome biogenesis [BR:
dzi03009
]
Eukaryotic type
90S particles
Helicases
111309233
Translation factors [BR:
dzi03012
]
Eukaryotic type
Initiation factors
eIF-4
111309233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-GeneID:
111309233
NCBI-ProteinID:
XP_022763961
UniProt:
A0A6P6AGN2
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MSAAATTSRATRRMGAEDEKLVFETTEGIEPIMSFDQMGLKDDLLRGIYNYGFEKPSAIQ
QRAVMPIINGRDVIAQAQSGTGKTSMIALTVCQVVDTASREVQALILSPTRELASQTEKV
IRTIGDFMNIQAHACIGGKSVGEDIRKLENGVHVVSGTPGRVCDMIKRRTLRTRAIKLLI
LDESDEMLSRGFKDQIYDVYRHLPPELQVCLISATLPHEILEMTSKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVS
SMHGDMPQRERDAIMAEFRDGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggccgcgacaactagccgagcgactcggcggatgggagccgaggatgagaag
ctagtgttcgagacgacggaaggaatcgagccgataatgagtttcgaccagatggggcta
aaagacgatctcctccgtggaatctacaattacggctttgaaaagccgtcagccatccag
cagagagccgtgatgccgataatcaacggccgtgacgtgattgcgcaagcccagtctggt
accggtaaaacttccatgattgccctcaccgtttgccaagtggtagacaccgctagcaga
gaggttcaggcattgatcttgtcacctacgagggaactggcatcgcaaacggagaaagtg
ataaggacaattggtgatttcatgaacatacaagcacacgcgtgtattggaggcaaaagt
gtgggtgaagatataagaaagctagaaaacggagtccatgtagtgtcgggaactcctggg
agagtctgtgatatgatcaagaggagaaccctacgtacaagggctattaaactattgatt
cttgatgaatctgatgagatgttgagcagaggtttcaaagatcaaatttatgatgtttac
agacatcttccacccgagcttcaggtttgtttgatatctgctacccttcctcatgaaatt
ttggagatgacgagcaaatttatgactgatcctataaggatccttgtgaagcgtgatgag
ttgactctggagggaattaagcagtttttcgtagcagttgaaagagaggagtggaagttc
gatacactatgtgatctttatgatacgttgacaatcacccaagctgttattttctgcaat
acaaaacgaaaggttgattggctaactgagaagatgcgtagcaataactttacggtgtca
tcaatgcacggggatatgcctcagagggaaagagatgcgattatggctgagtttcgggat
ggtgcaacccgtgttcttatcacaacagatgtttgggctagagggcttgatgttcagcag
gtgtccctggtaatcaattacgacctgccaaacaatcgagagctttacatccataggatt
ggtcggtcaggtcgatttggaagaaagggtgttgctattaattttgtgaaaagtgatgac
atcaaaattcttagagatatagagcagtattatagtacccagatagacgaaatgccaatg
aatgttgcggatctgatataa
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