KEGG   Durio zibethinus (durian): 111309985
Entry
111309985         CDS       T05242                                 
Name
(RefSeq) flowering time control protein FY-like isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111309985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dzi03019]
    111309985
Messenger RNA biogenesis [BR:dzi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     111309985
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_SPT8 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_HPS5 WD_LRWD1 Beta-prop_Vps41 Tricorn_2nd WD40_like Beta-prop_DCAF12 Beta-prop_RIG_1st Beta-prop_NOL10_N WDR54
Other DBs
NCBI-GeneID: 111309985
NCBI-ProteinID: XP_022764772
UniProt: A0A6P6AIQ4
LinkDB
Position
Unknown
AA seq 734 aa
MMYGDPQQQQNAPQSQGGEFQRGPPLIMRQPSASSTTLNSDYHYPAPHQVPPYDAHGDNF
AAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTILQPTPAAAIDVLPTAAYLDNPS
TSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQA
IRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSD
DTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGRELCSF
HGHKNTVLCVKWNQNGNWVMTAGKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEE
YFVSGSFDGSIFHWVVGHETPQVEIPNAHDNSVWDIAWHPIGYLLCSGSNDHTTKFWCRN
RPGDTARDKFNMGQNQGYGEQNPALAGRMPGNFAAPEGPTTPGPFAAGLTRNEGTIPGVG
VPMPLLVPSLDASSQGDQKQPLPGSMPFGAPPLPPGPHPSLLVANQQHGYQQNPQQIQQQ
QQQAMQQQIPPMQMAPPNMPQLMPLLPHPHLPRPPPQMPPLGMPSSVPSSMTGSLPPPSS
MPTSHQMPMPGPMGIQGTMNQMPPPLPQGHFMGMNPPLHSGSLPTSGTPSVGGFPNSMQN
MQGPANVGGGQMYPQGGAFNRAQGGQMPMMPAFNPYQVNWGRFFAVVMSFALLDLFCVCP
IFYVKGWICSQNQW
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgatgtacggtgatccacagcagcagcagaacgcgccgcagtcgcaaggtggggagttc
cagagaggtcctccgctaataatgcggcagccgtcagcttcttcgactactcttaactca
gattatcactaccctgctcctcatcaggttccgccttatgacgctcacggtgataatttt
gctgccaaaagaatgagaaagctgacccaaaggagggctgttgattatacgagcactgtt
gtgcgatatatgcagattcgtatgtggcagcgggattcacgggacaggacaatattgcag
cctactccagcagcagcaattgatgtgttgcctacagctgcctatttagataatccatcc
acaagctttgctgccaaatttgttcatacatctctaaacaaaaaccggtgttcaataaat
cgcgtattgtggactcccactggtagacgtctcatcacaggttctcagagtggggaattt
actttatggaatggacaatcatttaattttgaaatgattcttcaggcccatgatcaagcc
atcaggtctatggtttggagtcacaatgacaactggatggtttctggtgatgatgggggt
gcaataaagtactggcagaataacatgaataatgttaaggccaataaatctgctcacaaa
gaatcagttcgtgacttaagtttttgtaggacagatttaaagttttgttcctgttctgat
gatactactgtaaaagtgtgggactttgcccgctgccaggaggagcgttcgttaactggc
catggttgggatgttaaaagtgttgattggcaccctacaaaatccttactggtttcaggt
ggcaaagacaaccttgtgaaactttgggatgctaagacagggagagagctttgctcattt
catggccataaaaacacagtactttgtgtcaaatggaaccaaaatggtaattgggtgatg
actgctggaaaggatcaaatcatcaagctatatgacatcagggctatgaaggaacttgaa
tccttccgaggccacaggaaggatgtgactgcattggcttggcatccattccatgaagaa
tactttgtcagtgggagttttgatggatccattttccattgggttgttgggcatgaaact
ccccaggttgaaattcccaatgcacatgataatagcgtgtgggatattgcctggcatcct
attggatatctcctatgcagtggtagcaatgatcatacgacaaagttttggtgcagaaat
agacctggagatactgctcgtgataaatttaacatgggtcagaaccaaggctatggtgaa
caaaaccctgcattagctggtcgcatgcctggtaattttgcagcacctgaaggcccaaca
actccaggaccatttgctgctggtttgactcgaaatgagggaacgattcccggtgttgga
gttccgatgccattattagttccatctcttgatgcatcttctcagggggaccaaaagcag
cctcttccaggttccatgccttttggagctcctcctcttcctccgggaccacatccatct
cttcttgtagccaatcagcagcacggatatcaacaaaaccctcaacagattcaacaacag
caacaacaggcaatgcaacagcaaatacctcctatgcaaatggcgcctccaaatatgcca
cagttaatgcccctgcttccacatcctcatttaccacgccctccaccccaaatgcctccc
cttggtatgccttcatctgtcccatcctcaatgacaggatctttacctccaccttcatca
atgccaacatcacatcaaatgccaatgcctggtccgatgggtattcaaggtacaatgaat
cagatgcctcctccgttgccacaaggccattttatgggaatgaatccaccattgcattca
ggatccttgccaaccagtggtaccccctcagttggaggttttccaaatagtatgcaaaat
atgcagggcccagcaaatgtgggtggaggccaaatgtatccacagggtggtgcattcaat
cgtgcacagggtgggcagatgccaatgatgccagcgttcaatccttaccaggtaaattgg
ggaaggttctttgctgttgtaatgtcatttgctctccttgatctgttctgtgtttgcccc
atattttatgtcaaaggctggatttgcagccagaaccagtggtag

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