Durio zibethinus (durian): 111310096
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Entry
111310096 CDS
T05242
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
dzi
Durio zibethinus (durian)
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dzi03009
]
111310096
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111310096
Ribosome biogenesis [BR:
dzi03009
]
Eukaryotic type
Pre-60S particles
Helicases
111310096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Motif
Other DBs
NCBI-GeneID:
111310096
NCBI-ProteinID:
XP_022764966
UniProt:
A0A6P6AJI3
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MDSNSPNSSSALTDTRFSDLKPPLSEPIIEALSLAGFKFCTPVQAATIPLLCSFKDVAVD
AATGSGKTLAFLVPIVEILRRSSASPPKRHQVMGMIISPTRELSSQIYNVAQPFVSTLSN
VKSMLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMDRMDVLDFRNLEVLILDEADRL
LDMGFQKQINYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEMKLLNNSA
SFEQLSSSKTPSGLHLEYLECEADKKPSQLVDLLVKNKSNKVIIYFMTCACVDYWGVVLP
QLTALKGFSLIPLHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDP
PQDPNVFIHRVGRTARLGRKGSAIVFLLPKEEAYVEFLRIRRVPLQERKCVDDASDVVPR
IRSAATKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEIGKLGMGYGLLQLPSMPEV
KHHSLSTEGFTPVENINMDDIKYKDKSREKQRKKNLLAKKEREQQESKPQKPKKASNAAA
SVMRKKTAKQRRAAQTIEDEEELTREYRLLKKLKKGTIDESEFAKLTGAEDLL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggactccaactcaccgaattcaagcagcgcgttaactgacacgcgcttctccgacctg
aaaccgcctctctccgagccgattatcgaagccttgtctctagctggctttaaattctgt
accccagtccaagccgccacaatcccgttgctatgtagcttcaaggacgtagccgttgac
gccgccaccggctctggaaaaaccctagctttccttgtccctatcgtagagattttgcgt
cgatcctctgcttctcctcccaaacgtcaccaggtaatggggatgattatatcacctacg
agggagctttcgtcgcaaatctataacgtcgcacaacctttcgtttcgaccttgtccaat
gtaaagtctatgcttcttgttggaggtgttgaggtaaaagcagacgtcaagaaaattgag
gaggaaggagcgaatttattgattggcactcctggtagactttatgacataatggaccgg
atggatgtgttagattttcgtaacctcgaggttttgattttagatgaggctgataggctt
ctggatatgggatttcaaaagcagataaattatattatatctcgcttgccaaagcttcgt
agaactggtcttttttcagctactcaaacagaggctgttgaagagctatctaaagcagga
ctaaggaatccagtgagggttgaagttagagctgagatgaagttactaaataattctgct
tcatttgagcaattatcttcatcaaaaacaccctctggccttcaccttgagtatttggaa
tgtgaagcagataagaaaccatcacaacttgttgatctccttgtaaagaacaaatctaac
aaagttataatatattttatgacttgtgcttgtgttgactattggggagttgttcttccg
caactcactgcattgaagggtttctctttaatccctctacatggaaagatgaagcagact
gcaagggagaaagcattagcttcatttacctctctttcaagtggcattcttctatgtact
gatgttgcagcacgtgggcttgacattccaggtgttgattgtatagtgcagtatgatccc
cctcaagatcctaatgtatttattcacagagttgggagaactgctcggttgggtagaaaa
ggaagtgccattgttttcctattacctaaggaggaagcatatgtagaatttttgcgcata
agaagggttcctcttcaagagaggaaatgtgttgatgatgcttctgatgttgttcctcgg
ataaggtctgctgcaacaaaagaccgtgatgttatggagaaagggcttagagcatttgtt
tcctatatccgtgcatacaaagagcatcactgctcttacattttcagatggaaagaactt
gaaattggaaagttaggtatgggatatggtctattgcagctcccttctatgcctgaggta
aagcaccattcactttccactgagggtttcactccagttgagaacatcaatatggatgat
atcaagtataaggataaatctcgtgagaaacagaggaagaaaaatttgctagcgaagaaa
gaacgagagcagcaagaatcaaaaccccagaagccaaaaaaagcctcaaatgctgcagcc
tctgtcatgaggaagaaaacagccaaacaaagacgtgctgcccaaacaattgaagatgaa
gaggaattgacccgggaatatcgtctactgaagaaactaaaaaaggggactattgatgag
agtgagtttgcaaagttgacaggagctgaagatttactttga
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