Durio zibethinus (durian): 111310246
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Entry
111310246 CDS
T05242
Name
(RefSeq) spliceosome-associated protein 130 A-like
KO
K12830
splicing factor 3B subunit 3
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111310246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111310246
03041 Spliceosome [BR:
dzi03041
]
111310246
03036 Chromosome and associated proteins [BR:
dzi03036
]
111310246
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111310246
Spliceosome [BR:
dzi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111310246
Complex B
111310246
Complex C
U2 SnRNP specific factors
111310246
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
111310246
TFTC complex
111310246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
Beta-prop_BBS7
WDR55
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
111310246
NCBI-ProteinID:
XP_022765244
UniProt:
A0A6P6AK49
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MYLYNLTLQQATGIVCAINGNFSGGKIQEIVVARGKILSLLRPDDLGKLQTLHSVEIFGC
ILSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNIFDKVHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGVDCGFDNPI
FAAIELDYSEADQDSTGVAAGEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVPVPGG
GDGPSGVLVCAENFVIYKNQGHPDIRAVIPRRADLPEERGVLIVSAATHKQKSMFFFLLQ
TEYGDIFKVTLEHGSDGVTELRIKYFDTIPVTASMCVLKTGFLFSASEFGNHALYQFQAI
GDDPDVESSSSTLMETEEGFQPVFFQPRGLKNLVRIDQAESLMPIMDIKIANLFEEETPQ
IFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDAFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNGLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSH
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVKASVGGEDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSVKVRGRPAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETAIPLRYTP
RRFVFQPKRKLLVIIESDQGSYTAEEREAARKECFEAAGMGENGNGNLDQMENGGDDEDK
EDPLSDEQYGYPKAESNKWVSCIRVLDPRTAATTCLLELQDNEAAFSLCTVNFHDKEYGT
LLAVGTAKGLQFWPKRSLVAGFIHIYRFLEDGRSLELLHKTQVEGVPLALCQFQGRLLAG
IGSVLRLYDLGKKRLLRKCENKLFPNTIVSIHTYRDRIYVGDIQESFHFCKYRRDENQLY
IFADDVVPRWLTASYHVDFDTMAGADKFGNVYFVRLPQDVSEEIEEDATGGRIKWEQGRL
NGAPNKLEEIVQFHIGDVVTCLQKASLIPGGGECVLYGTVMGSLGALLPFTSRDDVDFFS
HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPLDLQRKIADELDRTPG
EILKRLEEVRNKII
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacaacttaactcttcaacaagctaccggcatcgtctgcgccataaacggg
aacttctccggcggaaaaatccaagaaatcgtggttgcccgtggtaagatcctttccctt
ctccgccccgacgatctcggtaagctccaaacacttcactccgttgaaatctttggctgc
atactttccctagctcaattccggctaaccggagctcaaaaggactacattgtagtaggg
tccgattcgggtcggattgttatccttgaatacaataaagaaaagaacatctttgataaa
gttcaccaagaaacttttgggaaatccgggtgtcgccggattgtcccgggtcaatactta
gctattgacccgaaaggaagagccgtaatgattggtgcttgtgagaaacagaaattagtt
tatgttttgaatagagatactgctgctaggttaaccatttcttcgcctttagaagctcat
aagtcgcatacgatagtttactcgatttgtggtgttgattgtggttttgataatcctatt
ttcgctgccattgagttggattactctgaggccgatcaggattccacgggagttgctgct
ggtgaggcacagaagcatttgacgttttatgaacttgatttagggcttaaccatgtgtct
aggaagtggtcagaacaggttgataatggggcaaatatgttggtccctgtgcctggtggt
ggtgatggcccgagtggggttttggtttgtgcagagaattttgttatttataagaatcag
ggtcatccagacattagagcggtcattcctagacgtgctgacttgccggaagaacgtggg
gttttgattgtttcagcagctacacataagcagaagtcaatgttcttctttcttttgcag
acagaatatggggatatttttaaggttacactggaacatggaagtgatggagttacggaa
ttgaggattaagtattttgatacaattccagttacagcttcaatgtgtgtgttgaaaact
ggttttctattctctgcctcagagtttggaaatcacgctttgtatcagtttcaggctatt
ggggatgaccctgatgttgagtcttcgtcatctacattgatggaaacagaagaaggtttc
cagccagtgtttttccagcctagagggcttaagaatctagttagaattgaccaagctgag
agcctgatgccaataatggacatcaaaattgctaatctctttgaggaagaaacacctcag
atattttcactctgtggacgtggtcctcgttcatctttgaggatattaaggcctggtttg
gccatcagtgagatggctgtctcccagcttcctggtgtcccaagtgctgtgtggacagtg
aaaaagaatgttaatgatgcctttgatgcatacattgttgtgtcatttgcaaatgcgact
cttgttctttccattggtgaaacagttgaagaagttagtgatagtgggtttcttgatact
actccttctcttgctgtttccttgattggtgatgattcgcttatgcaagttcacccaaat
ggtattaggcatataagggaagatggacgtattaatgagtggaggactcctgggaaaagg
acaattgttaaggttggctcaaatgggcttcaagtggttattgcattgagtggaggggag
cttatatactttgaggtggatatgactgggcaattgatggaagtggagaagcatgaaatg
tcaggagatgtggcgtgtctggacattgcccctgttcctgaaggaagacagaggtcccat
tttcttgcagttggttcatatgataatacaatccgtatattgtctttggatcctgatgat
tgtatgcagattctgagtgttcagagtgtctcttcacctcccgagtctctccttttcctt
gaagttaaggcatcagttggtggggaggatggtgctgatcatcctgcaagtcttttcctt
aatgctggtctgcaaaatggggttctgttccgaacagtagtggatatggttacagggcag
ctttctgattcccgttcacggttcttagggctgagagccccaaagttgttctctgttaaa
gtgagaggccgacctgcaatgctttgcttgtctagtcgaccatggcttggttatattcac
caaggacattttcttctaacaccgctttcttatgagacacttgaatttgctgcctcgttt
tcatctgatcaatgtgccgaaggtgttgttgctgttgccggggatgcattgagggttttc
accattgagcgtcttggagaaacctttaatgagactgctattcctttgaggtatacgcct
aggaggtttgtttttcaaccaaagaggaaattgttagtaattattgagagtgaccaagga
tcatatactgcagaagagcgtgaagctgcaagaaaggaatgctttgaggctgctggaatg
ggagaaaatggtaatggtaatttggaccaaatggaaaatggtggtgatgatgaggacaaa
gaggatcccctctccgatgagcagtatggttatccaaaggcagagtcaaacaagtgggtt
tcttgcattagagttcttgatccaaggacagcagccacgacttgtcttttggagcttcag
gacaatgaagctgctttcagtttgtgcaccgtgaatttccatgataaagaatatggaact
ctcttggctgttggcacagccaagggtctgcagttttggcccaaaagaagcttagttgca
ggattcattcatatttataggtttcttgaagatggcaggtcgcttgaacttctgcacaag
acacaagtggaaggtgttcctcttgctttatgccagtttcagggaagattacttgctggg
ataggatctgtgctccgattatatgacttggggaaaaagagactgcttaggaaatgtgag
aataagcttttccctaacactattgtctctatccacacttatcgtgatcgaatatatgtt
ggggacattcaagagtcattccatttttgcaagtataggagggatgaaaatcaactgtat
atatttgctgatgatgttgttccaagatggcttactgcatcataccatgtagattttgac
accatggctggtgcagacaagtttgggaatgtctattttgtgcggctaccacaagatgta
tcagaggagatagaagaagacgcaactggtggaaggataaaatgggaacaagggaggcta
aatggagctcctaacaagttagaggagatagttcagttccatattggagatgtggttact
tgcttgcagaaggcatctctgataccaggtggtggagagtgtgttctttatggaacagta
atggggagtttgggggcattgcttccattcacttcccgtgatgatgttgacttcttttct
cacctagagatgcatatgagacaggaacaccctcccttgtgtggacgagatcatatggct
tatagatctgcttatttccctgtcaaggacgtgattgatggggatttgtgtgagcagttt
cctaccctacctttagatttgcagagaaaaattgcagacgagttggatcgaactccaggg
gagatactgaagagacttgaagaagttcgaaacaagattatttga
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integrated database retrieval system
