Durio zibethinus (durian): 111310427
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Entry
111310427 CDS
T05242
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03030
DNA replication
dzi03410
Base excision repair
dzi03420
Nucleotide excision repair
dzi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111310427
03410 Base excision repair
111310427
03420 Nucleotide excision repair
111310427
03430 Mismatch repair
111310427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dzi03032
]
111310427
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111310427
DNA replication proteins [BR:
dzi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111310427
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111310427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
RCF1-5-like_lid
AAA_22
AAA_30
PTCB-BRCT
AAA_19
Rad17
AAA_18
AAA_assoc_2
RuvB_N
BRCT_2
Gp44_lid
AAA_5
AAA_24
nSTAND3
Zeta_toxin
DNAX_ATPase_lid
Sigma54_activ_2
AAA_28
AAA_14
AAA_2
NTPase_1
TsaE
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
111310427
NCBI-ProteinID:
XP_022765610
UniProt:
A0A6P6ALA8
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MSDIRKWFMKAHDKGKGNGNGSASKPENAAPTNTEPVPGGQENSGRRKTSKYFPAEKQKA
KVEQGTAELPAKRKAQNDSIEKPSPLKKPSRADVDDDFVLPKSKNSVDVTRSKKLKSVSG
RAVAQKAVDVYDSDEDDAKDLESPVKSGGRGRGGRGASVGPASGRGRGGGRGGFMNFGER
KDPPHKGEKDVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRFGGRVTGSVSKKTNYL
LCDEDIGGRKSSKAKELGTTFLTEDGLFDMIRASNHGKSHSKEESKKSAVNIATSPPKKS
PQKVEVKKLSKSPSKSVSSAKQRGQPIQHSSLTWTEKYRPKVPNEITGNQSLVNQLHNWL
AHWNEQFLGTGSKGKGKKQNDTGAKKAILLSGTPGIGKTTSAKLVSQMLGFQTIEVNASD
SRGKADASISKGIGGSNANSIKELVSNEALSVNMDRSKHPKTVLIMDEVDGMSAGDRGGI
ADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMQVANAEGLQ
VNEIALEELAERVNGDMRMALNQLQYMSLSTSVIKYDDIRQRLLTSSKDEDISPFTAVDK
LFGFNGGKLRMDERIDLSMSDPDLVPLLVQENYINYRPSSIGKDDSGMKRMKSIARAAES
IGDGDIINVQIRRYRQWQLSQTASLSSCIIPAALLHGQRETLEQGERNFNRFGGWLGKNS
TMSKNYRLLEDFHVHVLASRESSSGRETLRLDYLTALLKRLTNPLRDKPKDEAVKEVVEF
MNAYSISQEDFDTVVELSKFQGHLNPLEGIPTAVKAALTRAYNEGSKTRMVRAADLVTLP
GIKKAPKKRIAAILEPSDDILGEENGDTLPENEENASDTENLEDTTNGEKLQAELQSLNS
RGIEVQMELKGTGNSSAKKGLVGRGKGGKGSAEKKGGRGSGAGAKRKR
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatattaggaagtggtttatgaaagcgcacgataaaggcaaaggcaatggcaat
ggcagtgcctcaaagccagaaaatgcggcgccaactaatacagagcctgtacctggaggc
caagaaaattctggcagaagaaaaactagcaaatattttcctgcagaaaaacaaaaggca
aaggttgaacagggaacagctgaacttccagctaagagaaaagctcaaaatgacagtatt
gaaaaaccctcacctttgaagaaaccaagcagagctgatgttgatgatgactttgttctg
cccaaatctaagaactctgtggatgttactcggagtaagaaactgaagagtgtttctggc
agggctgttgcacaaaaagctgtagatgtttatgacagtgatgaagatgatgctaaagat
ttggagtctcctgtaaagtctggtggaaggggtcgtggtggcaggggtgcatcagtggga
ccagctagcggacgaggcagaggtggtggacgaggtggatttatgaattttggagaaagg
aaagatcctcctcataaaggagagaaggatgtccctgaaggtgctcctgattgcttagct
ggtctaacttttgtaattagtggaacacttgacagtttagaaagagaggaagctgaggac
ttgatcaaacgctttggtggtcgtgttactggatctgtcagcaaaaaaacgaattatctt
ttatgtgatgaagatattggaggtcgaaagtcctctaaagccaaagagcttggcactact
tttcttactgaggatggattgtttgacatgatccgtgcatcaaatcatggaaaatctcat
tcgaaagaagagtcaaaaaaatctgctgtcaacattgctacttctccacctaagaagagc
ccccagaaagtggaagtgaagaagttatccaaaagtccaagcaaaagtgtctcatctgca
aagcagagagggcaaccaatccagcattcttctctgacatggactgaaaaatataggcca
aaagttccaaatgaaatcactgggaatcaatcattggttaaccagctccataattggttg
gcacattggaacgagcaatttcttggtactggaagtaagggaaagggtaaaaagcaaaat
gatactggtgccaaaaaggctattctattaagtggaacacctggaattgggaaaactaca
tcagcaaagttggttagtcagatgctaggtttccagaccattgaggtaaatgctagtgac
agtcgtggaaaggctgatgccagtatttctaaaggaattggtggaagcaatgcaaattca
ataaaggaactagttagcaatgaagccttgagtgttaatatggatcgttcaaaacatcca
aagactgtcctgattatggatgaggtggatggcatgtctgctggtgatagaggtggaata
gctgatcttattgccagcataaagatttccaaaatcccaatcatttgcatttgtaatgac
cgctacagtcagaaactgaagagtcttgtaaactactgcttacttcttagtttccgtaaa
cctaccaaacagcagatggccaagaggttaatgcaagttgcaaatgcagaaggccttcaa
gttaatgagattgctcttgaggaacttgcagaaagagtgaatggagatatgcgaatggcc
ctgaatcaactgcagtacatgagtctgtccacgtcagtcattaagtatgatgacataagg
caacgtctccttaccagttccaaggatgaagatatttcacccttcacggctgttgataag
ctgtttggctttaatggaggaaagttgagaatggatgaacgaattgacctgagcatgagt
gatcctgatctagttccacttcttgttcaggaaaattatatcaattataggccgagttca
attggtaaagatgacagtgggatgaaaagaatgaaatcgattgcccgagctgctgagtct
attggtgatggtgatataatcaatgttcagattcgaagatatcggcagtggcagctctca
caaactgcttccctttcatcgtgtatcattcctgctgccttattacatggacaaagggag
acacttgaacagggagaacggaattttaatagatttggtgggtggctaggaaagaattca
actatgagcaaaaattataggctgttggaggattttcatgttcatgttcttgcttctcgt
gaatctagttctggaagagagacccttcgacttgactatcttacagctcttctgaaaaga
ttgactaatcctcttcgagacaagcctaaggatgaagctgttaaggaggttgtagagttt
atgaatgcttactcgataagccaggaggattttgatactgttgtggagttatctaaattc
caggggcatttgaatccactggagggcattccaacagctgtcaaagcagctctgacaaga
gcatacaatgaaggaagcaaaacgcgaatggtacgagctgcagatttagtaactctccct
ggaattaaaaaggcccctaagaagcgaattgctgcaattctagaaccatcagatgatata
ttaggggaggagaatggtgacacattgccagaaaatgaagagaatgcttcagatactgag
aacttggaagacactaccaatggtgagaagttgcaggcggaacttcagagtctgaattcc
agaggaattgaagtacaaatggagttgaaagggacaggaaactcaagtgctaagaagggg
ctggttggtcgaggaaaaggtgggaagggatctgctgaaaagaaaggcgggcgtggttca
ggggccggagcgaagagaaaaagatga
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