Durio zibethinus (durian): 111310428
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Entry
111310428 CDS
T05242
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111310428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111310428
03012 Translation factors [BR:
dzi03012
]
111310428
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111310428
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111310428
Translation factors [BR:
dzi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111310428
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
T2SSE
AAA_16
Myosin_head
ABC_tran
PhoH
Motif
Other DBs
NCBI-GeneID:
111310428
NCBI-ProteinID:
XP_022765615
UniProt:
A0A6P6ALB3
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MQNPKLRGLLLGFNFTNARTTTLFDSLLFLLTNSSSSTSSNARFCLPKRRRFCGYAAEQF
SDDEYECDFESHKASSSVANIDEWKWKLSMLLRSENDQEIVSRDKRDRRDYEQISNLAKR
MGLYSEMYGKVVVASKVPLPNYRPDLDDKRPQREVVVPLGLQRRVEGLLQEYLDRLQLNS
GKVRKNSDDVNSIDQAEYLNPDENPDSFLDNSVMEKVLQRRSLRLRNMQRAWQESPEGKK
MMEFRKSLPAFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIETGRGAFCSI
ICTQPRRISAMAVAERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSD
RNLNGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGAP
KIHIPGFTYPVRAHFLEDVLEFTGYKLTSFNQIDDYGQEKMWKMQKQLAPRKRKNQITAL
VEDALNKPSFENYSSRARDSLACWMPDCIGFNLIEAVLCHTCRKERPGAVLVFMTGWEDI
SCLRDQLKAHPLLGDPNRVLLVTCHGSMATSEQKLIFDKPPPNVRKIVLATNMAEASITI
NDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGECYHLYPRCVY
EAFSEYQLPELLRTPLNSLCLQIKSLQVESIGEFLSAALQAPEPLAVQNAVDFLKMVRAL
DEKENLTNLGKFLSMLPVDPKLGKMLIMGAIFRCFDPVLTIVSGLSVRDPFLLPQDKKDL
AGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSVQTLQAIHSLRKQFS
FILREAGLVDADAGSNNKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVLL
YANSVNARYQTIPYPWLVFGEKVKVNTVFIRDSTGVSDSILMLFGGALSCGVQAGHLKML
QGYIDFFMDSSLAECYLKLKEELDRLIQKKLQDPSIDIHKEGKYLMLAVQELVSGDLCEG
RFVFGRECRKPKDPNDNSRFARDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVE
FKGMQFVGKPRKNKQLAERDAAIEALAWLTHTSDNSRDEDDSPIDVTDNMLKLLGKRRRS
KRR
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccaaagctaagagggctccttttgggattcaatttcactaacgccagaacc
accaccttgtttgattcactccttttcctactcacaaattcttcgtcttctacttcttct
aatgcaaggttttgtctccctaaaagacgtcgtttctgcgggtacgctgcagagcaattc
tcagatgatgaatacgagtgcgattttgagagccacaaggcctcgtcttctgttgccaac
atagatgaatggaaatggaagctcagcatgttgttacgcagtgaaaatgaccaagaaatt
gtttctagagataaaagagataggagagactatgaacagatttccaaccttgctaaaagg
atgggactttacagtgaaatgtatgggaaagtggttgttgcaagcaaggttccactgcct
aactataggccagatttggatgataaacggccacaacgggaggttgttgtaccgttaggc
ttgcaaaggagggttgagggtttactgcaagaataccttgatcgactgcagttaaattct
gggaaggtcagaaagaattcagatgatgtgaattccattgatcaagctgaatatctgaac
cctgatgagaatccagattctttcttggataactctgttatggaaaaggttcttcaaagg
aggagtttgcgactgcgtaatatgcaaagagcttggcaggaatcacctgaaggcaagaag
atgatggaatttcggaaatctctgcctgcattcaaggaaaaggaaaggcttcttcaagca
attgcacgtaatcaggtcatagtgatatcaggggagactggatgtggcaagaccactcaa
cttccacaatacatactggagtcagaaatagaaactggtcgtggagcattctgtagcata
atttgcacacagcctcgaagaatatctgctatggcagttgcagaaagagtgtctgctgaa
agaggagagcctctcggggaaacagttggttataaagttcggttggagggtatgaaaggg
aaaaatacccatctgcttttttgtaccagtggtattttacttcgccggctgctaagcgac
cggaacttgaatggtataacacatgtttttgttgatgaaattcatgagcgaggaatgaat
gaagatttcctacttattgtgttgaaggatcttcttccacgccgtcgagatttgagatta
attttaatgagtgccaccttgaatgctgagctcttctccaattattttggtggggcacct
aaaattcacattccgggctttacatatccagtcagggcacattttctggaagacgtgctg
gaatttactggatataagttgacttctttcaaccaaattgatgattatggccaagaaaaa
atgtggaaaatgcagaagcaacttgctccacggaaaaggaaaaaccagattactgctctt
gtagaggatgctctgaacaaaccaagctttgagaattatagttcaagggcacgtgattct
ctagcatgttggatgcctgattgcataggattcaatcttattgaggcagttctatgccat
acatgccgaaaggaaagaccaggtgctgtgctagtatttatgactggttgggaagatatc
agttgtttaagggatcaacttaaagctcatccccttttgggagatcctaacagggttctg
cttgtaacatgccatggttccatggcaacatctgaacagaaattaatatttgacaaacca
cctcctaatgtacgtaagattgttcttgctacaaatatggcagaggcaagcattaccata
aatgatatagtttttgtggtagattgtggaaaagcaaaagagaccacttatgatgctttg
aataatacaccctgtctgctaccttcctggatatctcaagcatcagctcggcaaagaagg
ggtagggctggtcgtgtgcagccaggtgaatgctaccacctatatcccagatgtgtttat
gaagctttttctgagtatcaacttcctgaacttttaagaactcccttgaattctctctgc
ttgcaaataaaaagtttgcaggtagaaagcattggagaattcttgtcagcagctttgcaa
gcaccagaaccattggctgtccaaaatgctgttgattttctgaaaatggtcagggcttta
gatgagaaggaaaatctcactaatcttggaaagtttttgtcgatgcttcctgtagatccc
aagctagggaaaatgctaatcatgggtgctatcttccgttgctttgatcctgtattaaca
atagtatcaggacttagtgtcagggatccttttcttttgcctcaagacaagaaggattta
gctgggacagcaaagtctagattttctgcgaaagactacagtgatcacatggctcttgtc
cgtgcctatgaaggctggaaagatgcagaaagagaaggatcagcatatgagtattgttgg
agaaacttcctgtctgtacaaactcttcaggctattcattctcttcggaaacaatttagt
ttcattctaagagaagctggcttggtagatgctgatgctggctccaacaataaattaagt
cacaaccagtctctggttcgtgctgtcatatgctctggactctttcctggaatagcatct
gtggtgcacagagagacatcgatgtcttttaaaacaatggacgacggccaggttttatta
tacgctaattctgtgaatgcacgttaccagacaattccttacccatggctagtctttggt
gaaaaagtaaaggtcaatacagttttcatacgtgattccactggtgtatctgattctata
ttgatgctctttggtggtgctctaagctgtggggtacaggctgggcatttgaaaatgtta
caaggatatattgatttcttcatggattctagcttggcagagtgctacttgaagctcaaa
gaagaacttgatagacttattcagaagaagcttcaagatcctagcattgatattcacaag
gaaggaaagtacctcatgcttgcagttcaagagctagtgtcaggagatctatgtgaaggg
agatttgttttcggccgtgaatgcaggaagcccaaggatcccaatgacaacagtagattc
gcaagggatggaacaaatccaaagagcttgctacaaactttgttgatgagggcagggcat
tcacctccaaaatacaagacgaagcatcttaagacaaatgagtttagggcattagtggaa
ttcaaaggaatgcagtttgtgggaaagcctaggaaaaacaagcagcttgctgaaagggat
gctgctatagaggcattggcatggttaactcatacctctgacaacagtcgtgatgaagat
gattcccctattgatgtcactgacaacatgctaaaacttcttgggaagcgtcgaagatca
aaacgccgatag
DBGET
integrated database retrieval system
