Durio zibethinus (durian): 111310463
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Entry
111310463 CDS
T05242
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
dzi
Durio zibethinus (durian)
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111310463
03036 Chromosome and associated proteins [BR:
dzi03036
]
111310463
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111310463
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111310463
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HHH_9
HTH_44
HHH_3
SH2
OB_PDCD11
Tex_N
VSG_B
Motif
Other DBs
NCBI-GeneID:
111310463
NCBI-ProteinID:
XP_022765684
UniProt:
A0A6P6ALE6
LinkDB
All DBs
Position
Unknown
AA seq
1577 aa
AA seq
DB search
MGRNVVSDEEDELEVDEEGEPIDTLNGRDPDDDDEEDEEGQDEYENDGFIVDDVEDEEVD
EDEEREDSDEERRKKKKKRKKKEAEDLDEDDYELLRENDVNVPKGSKKFKRLKKAQRDLY
EERFGLSEDEFDGSMKGGTTAEEKLKRTLFGDDDGQPLEDIPEDEEQIEEEEDGDMGEED
EMADFIVEEDDVHGASVRRKKMKNKKSRHALDVSSSALKEAQDIFGDVDELLLLRKQGLD
YSDRKERRLEDQFEPTVLSEKYMTEKDDEIRTIDIPERMQISEGSTGTPPTDEESIIEES
TWIHKQLISGAIPLFVQERKDLSINKDEIMVFLDLTHMQKLDIPFIAMYRKEQCLSLLQD
PEQLEVDDVHHDKSEKTPTIKWHRVLWAIQDLDRKWLLLQKRKSGLQSHYNKRFEEESRR
IYDETRLNLNQQLFESILKDLKDAESEREVDDVDAKFNLHFPPGEVGVDEGQYKRPKRRS
QYSICNKAGLWEVVSKFGYSAQQLGSLLSLERLPDELEDAKETPEEMASNFTCAMFETPQ
AVLKGARHMAAVEISCEPSVKKYVRGIYMENAVVSTSPTSDGKIAIDSFHQFAGVKWLRE
KPLSRFEDAQWLLIQKAEEEKLLQVTVKLPEKCLNQLIKECNELYLSNGVSKSAQQWNEQ
RKLIFSDALYGFLLPSMEKEARSLLASRAKNWLLFEYGKGLWNKVSVGPYQRKENDINSD
EEAAPRVMACCWGPGNPATTFVMLDSSGEVLDVLYTSSLTLRSQNVNDQQRKKNDQQRVL
KFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDELSIVYGDESLPR
LYENSRISSDQLPGQSGIVKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFLTT
DEKYGMIEQVLVDVTNQVGLDVNLAASHEWLFAPLQFISGLGPRKAASLQRSLVRVGTIF
SRKDFLTTHGFGKKVFVNAIAFLRVRRSGLAANSSQFIDLLDDTRIHPESYLVAQELAKD
VYDEDFKGDNDDEDALEMAIEHVRDRPSLLKSLRLDNYLKSKGRQNKRETFYDIRRELIQ
GFQDWRKQYKEPSQDEEFFMISGETEDTLSEGLIVQATVRRVQGGRAVCVLESGLTGMIM
KEDYADDWRDIIELSDRLHEGDILTCKIKSIQKNRYQVFLVCKDSEMRSNRYHLVQNLDP
YYHEERSSIQSEQEKARKEKELAKKHFKPRMIVHPRFQNITADEAIEYLSDKDPGESIIR
PSSRGPSYLTLTLKVYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMD
RYVDPLVSHLKAMLSYRKFRRGTKTEVDELLRIEKSEYPMRIVYCFGISHEHPGTFILTY
IRSTNPHHEYVGLYPKGFKFRKRMFEDIDRLVAYFQRHIDEPQHESAPSIRSVAAMVPMR
SPAAGGSAGASMGSSWGGSTNEGGWRGHSFDRGQSSTPGSRTGRNDYRNSSNRDGHPSGV
PRPYGGRGRGRGSYNSSRGQNEGQDSSFDETSKWDSGTKKGGDGWGNFPGAKVQNSPGRE
AFPGGWGSGGTESGSGW
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaacgtcgtttctgatgaagaagatgaattggaggtcgacgaagaaggagag
cccattgacacactcaatggccgcgaccctgatgacgacgatgaagaagacgaagaaggg
caggatgagtatgagaatgatggattcatagttgatgatgtggaggatgaagaggtagat
gaagatgaagagagggaagatagcgatgaggagaggcggaagaaaaagaaaaaaagaaag
aagaaggaagctgaggaccttgatgaagatgactatgagctcctccgggagaatgatgtt
aatgtaccaaagggtagcaagaaatttaagcggttaaaaaaagctcaaagagatttatat
gaggaacgatttgggctttctgaagatgagtttgatggaagcatgaagggtgggacaact
gctgaggaaaagcttaagcgtaccttatttggtgatgatgatggacaacctcttgaggat
attcctgaagatgaagagcaaatagaggaggaggaggatggagatatgggtgaagaagat
gaaatggcagactttattgtagaagaagatgatgtgcatggagcttctgttagacggaag
aagatgaagaataagaagtcaaggcatgcacttgatgtttcgtcatctgctttaaaggaa
gctcaagatatatttggtgatgttgatgaactccttctgctacgcaaacagggcttagat
tatagtgaccggaaagaaaggagacttgaagatcaatttgaacccactgttctttctgaa
aagtatatgacagaaaaggatgacgaaattcggacgattgatattccagaaagaatgcag
atttctgagggaagcaccggcactcctccaacagatgaagagagcataatagaagagagt
acctggatacataaacaacttataagtggtgcaatacctttatttgttcaagaacggaag
gatctttccataaacaaggatgagattatggtgtttttggatctaacacatatgcagaag
ttagatattccctttattgcaatgtatcgcaaggagcagtgcctaagtctgctacaagat
cctgagcaacttgaggttgatgatgttcatcatgataaatctgagaaaacacctacaata
aagtggcacagggtactttgggcgattcaggacctggaccgaaaatggctgcttcttcaa
aagagaaagagtggtcttcagtcacactataataaacgatttgaagaagaatctcgtcgg
atatatgatgagacaagacttaacttgaatcagcagctttttgagtcaattcttaaagat
cttaaggatgcagagtcggaaagggaagttgatgatgttgatgccaagtttaacttgcat
ttcccgccaggggaggttggtgtggatgaaggtcaatataagagacccaagaggagatca
caatatagtatttgcaataaggctggcttgtgggaggttgtgagcaagttcggatacagt
gctcagcaacttggatcactgctatctctggaaaggctgcctgatgagttggaagatgct
aaggagacgccagaagagatggcttcaaactttacgtgtgcaatgtttgagactccacaa
gctgtccttaaaggagccaggcatatggctgcggtcgagataagttgtgagccatctgtc
aagaaatatgttcgtggtatctatatggagaatgctgtagtttcaaccagtcctacttct
gatggaaaaatagccatagattctttccatcaatttgcaggtgtgaagtggttgcgtgaa
aaaccattgagcagatttgaggatgcacagtggctccttatccagaaggctgaagaggag
aagcttcttcaagtaactgttaagcttccagaaaagtgtctgaatcagttgattaaagaa
tgtaatgaactatatctcagtaatggcgttagtaaatctgctcaacaatggaatgaacag
agaaagcttatattcagtgatgctctttatggttttcttttgccatcaatggagaaagaa
gcaagatccttgttggctagtagagctaagaactggttacttttcgaatatggcaagggt
ttatggaataaagtttctgtggggccttaccaaaggaaggaaaatgatattaattctgat
gaggaagctgcaccacgagtcatggcttgctgttggggccctgggaatcctgcaaccact
tttgtgatgctagattcatccggggaggtgcttgatgtgctttacactagttctcttaca
ttacggtctcaaaatgttaatgaccagcaacgcaagaaaaatgatcagcaacgtgttttg
aagttcatgactgatcatcaaccacatgttgttgttcttggagctgtgaatttgtcttgt
acccggttgaaagatgatatttatgagattatttttaagatggtggaggaaaatcctaga
gatgttgggcatgaaatggatgagctgagcattgtatatggggatgaatctctaccccgt
ctttatgaaaattctaggatttcatcagatcagctacctggccagtcaggtattgttaag
cgggctgttgctcttggccgttatcttcaaaatccattggcaatggttgctactttgtgt
ggaccaggtaaggagatattgtcttggaagcttaatcctttggagaactttctaacgaca
gatgagaagtatggcatgattgaacaggttttggtcgatgtcacaaaccaggtcggcctt
gatgttaatttggctgcaagccatgaatggttgtttgctcctttgcaattcatttctggc
cttgggcctagaaaggcagcatcactgcagagatcattggtaagagttggaacaattttc
agtcggaaggactttttgacaacccatggatttggtaagaaggtgtttgtcaatgcgata
gcttttctgcgtgtccgtcggagtggtcttgctgccaacagcagccagttcattgatttg
ttggatgatactagaatacatccagaatcttatcttgttgcccaggagttggccaaagat
gtctatgatgaggattttaaaggtgacaatgatgatgaggatgcattggagatggcaata
gaacatgttagggaccggcctagtttgttgaaaagccttcgtcttgataattatctaaaa
agcaaggggcgccaaaataagagggagaccttttatgatataagaagggaattaattcag
ggctttcaggattggcgtaaacaatataaagaaccaagtcaagatgaggagttcttcatg
atttcaggggaaactgaggataccctgtcagaaggcctaattgtgcaagctacagttcgc
agagtgcaaggtggacgagccgtctgtgtacttgaatctggattgactgggatgattatg
aaagaagactatgcagatgattggagagatattattgagttgtctgataggctgcatgaa
ggtgacatcctgacctgcaagattaaatcaattcaaaagaataggtatcaggtgtttctg
gtttgtaaagatagtgagatgagaagcaaccgataccaccttgtccagaaccttgatcct
tactaccatgaggagcgaagcagtatacagagtgagcaagagaaagcacgtaaagagaag
gagctggctaagaagcattttaagccaaggatgattgtccatccacgcttccaaaatatt
actgcggatgaagctattgagtatttatctgacaaggatcctggagaaagcattatccgt
cccagttcacgcgggccttcttatttaactttaactctcaaagtatatgatggagtttat
gctcacaaagatattgttgaaggtggaaaagaacacaaggacatcaccagcctgctccgc
attgggaagacattgaaaattggggaagacacttttgaggatttggatgaggtaatggac
cgatatgttgatccccttgtgtctcatctaaaggcgatgttgagttatcgtaagttcagg
aggggaactaaaacagaggttgatgagcttctaaggattgagaaatcagagtaccctatg
aggattgtgtattgttttggaatttctcatgaacatccaggcactttcattcttacttat
ataaggagtacaaatccgcatcatgagtatgttggcttatatcccaagggattcaagttc
agaaaaaggatgtttgaagacattgatcgtctggttgcatatttccagaggcatattgac
gagccacagcatgagtcagctccatcaattagatcagttgcagcaatggtaccaatgcgg
agccctgctgctggaggctctgcaggggcatctatgggtagtagttggggtggttcaacc
aatgaaggtggttggagaggccactcttttgacaggggtcaatcttccactccagggtca
agaacaggccgaaatgattacagaaatagcagtaaccgagatgggcatccaagtggtgta
ccacggccatatggtgggcgtggacgtggtaggggctcatataacagcagcagaggacag
aacgaggggcaggattcatcttttgatgagacttccaagtgggattcaggtaccaagaaa
gggggtgatgggtggggtaattttccaggtgcaaaagttcaaaactctccaggtagggaa
gctttccctggtgggtggggcagtggtggaactgaaagtggcagtggttggtaa
DBGET
integrated database retrieval system
