Durio zibethinus (durian): 111310464
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Entry
111310464 CDS
T05242
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
dzi
Durio zibethinus (durian)
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111310464
03036 Chromosome and associated proteins [BR:
dzi03036
]
111310464
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111310464
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111310464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HHH_9
HTH_44
HHH_3
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
111310464
NCBI-ProteinID:
XP_022765688
UniProt:
A0A6P6ALI3
LinkDB
All DBs
Position
Unknown
AA seq
1576 aa
AA seq
DB search
MGRNVVSDEEDELEVDEEGEPIDTLNGRDPDDDDEEDEEGQDEYENDGFIVDDVEDXEVD
EDEEREDSDERGGRKRKKKEEGSEDLDEDDYELLRENDVNVPKGSKKFKRLKKAQRDLYE
ERFGLSEDEFDGSMKGGTTAEEKLKRTLFGDDDGQPLEDIPEDEEQIEEEEDGDMGEEDE
MADFIVEEDDVHGASVRRKKMKNKKSRHALDVSSSALKEAQDIFGDVDELLLLRKQGLDY
SDRKERRLEDQFEPTVLSEKYMTEKDDEIRTIDIPERMQISEGSTGTPPTDEESIIEEST
WIHKQLISGAIPLFVQERKDLSINKDEIMVFLDLTHMQKLDIPFIAMYRKEQCLSLLQDP
EQLEVDDVHHDKSEKTPTIKWHRVLWAIQDLDRKWLLLQKRKSGLQSHYNKRFEEESRRI
YDETRLNLNQQLFESILKDLKDAESEREVDDVDAKFNLHFPPGEVGVDEGQYKRPKRRSQ
YSICNKAGLWEVVSKFGYSAQQLGSLLSLERLPDELEDAKETPEEMASNFTCAMFETPQA
VLKGARHMAAVEISCEPSVKKYVRGIYMENAVVSTSPTSDGKIAIDSFHQFAGVKWLREK
PLSRFEDAQWLLIQKAEEEKLLQVTVKLPEKCLNQLIKECNELYLSNGVSKSAQQWNDQR
KLIFSDALYGFLLPSMEKEARSLLASRAKNWLLFEYGKGLWNKVSVGPYQRKENDINSDE
EAAPRVMACCWGPGNPATTFVMLDSSGEVLDVLYTSSLTLRSQNVNDQQRKKNDQQRVLK
FMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDELSIVYGDESLPRL
YENSRISSDQLPGQSGIVKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFLTTD
EKYGMIEQVLVDVTNQVGLDVNLAASHEWLFAPLQFISGLGPRKAASLQRSLVRVGTIFS
RKDFXTTHGFGKKVFVNVIAFLRVRRSGLAANSSQFIDLLDDTRIHPESYLVAQELAKDV
YDEDFKGDNDDEDALEMAIEHVRDRPSLLKSLRLDNYLKSKGRQNKRETFYDIRRELIQG
FQDWRKQYKEPSQDEEFFMISGETEDTLSEGLIVQATVRRVQGGRAVCVLESGLTGMIMK
EDYADDWRDIIELSDRLHEGDILTCKIKSIQKNRYQVFLVCKDSEMRSNRYHLVQNLDPY
YHEERSSIQSEQEKARKEKELAKKHFKPRMIVHPRFQNITADEAIEYLSDKDPGESIIRP
SSRXPSYLTLTLKVYDGVYANKDIVEGGKEHKDITSLLRIGKTLKIGXDTFEDLDDVMDR
YVDPLVSHLKAMLSYRKFRRGTKTEVDELLRIEKSEYPMRIVYCFGISHEHPGTFILTYI
RSTNPHHEYVGLYPKGFKFRKRMFEDIDRLVAYFQRHIDEPQHESAPSIRSVAAMVPMRS
PAAGGSAGASXGSSWGGSTNEGGWRGHSFDRGQSSTPGSRTGRNDYRNSSNRDGHPSGVP
RPYGGRGRGRGSYNSSRGQNEGQDSSYDETSKWDSGTKKGGDGWGNFPGAKVQNSPGREA
FPGGWGSGGTESGSGW
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaacgtcgtttctgatgaagaagatgaattggaggtcgacgaagaaggagag
cccattgacacactcaatggccgcgaccctgatgacgacgatgaagaagacgaagaaggg
caggatgagtatgagaatgatggattcatagttgatgatgtggaggatngagaggtagat
gaagatgaagagagggaagatagcgatgagagaggcggaagaaaaagaaaaaagaaagaa
gaaggaagtgaggaccttgatgaagatgactatgagctcctccgggagaatgatgttaat
gtaccaaagggtagcaagaaatttaagcggttaaaaaaagctcaaagagatttatatgag
gaacgatttgggctttctgaagatgagtttgatggaagcatgaagggtgggacaactgct
gaggaaaagcttaagcgtaccttatttggtgatgatgatggacaacctcttgaggatatt
cctgaagatgaagagcaaatagaggaggaagaggatggagatatgggtgaagaagatgaa
atggcagactttattgtagaagaagatgatgtgcatggagcttctgttagacggaagaag
atgaagaataagaagtcaaggcatgcacttgatgtttcgtcatctgctttaaaggaagct
caagatatatttggtgatgttgatgaactccttctgctacgcaaacagggcttagattat
agtgaccggaaagaaaggagacttgaagatcaatttgaacccactgttctttctgaaaag
tatatgacagaaaaggatgacgaaattcggacgattgatattccagaaagaatgcagatt
tctgagggaagcaccggcactcctccaacagatgaagagagcataatagaagagagtacc
tggatacataaacaacttataagtggtgcaatacctttatttgttcaagaacggaaggat
ctttccataaacaaggatgagattatggtgtttttggatctaacacatatgcagaagtta
gatattccctttattgcaatgtatcgcaaggagcagtgcctaagtctgctacaagatcct
gagcaacttgaggttgatgatgttcatcatgataaatctgagaaaacacctacaataaag
tggcacagggtactttgggcgattcaggacctggaccgaaaatggctgcttcttcaaaag
agaaagagtggtcttcagtcacactataataaacgatttgaagaagaatctcgtcggata
tatgatgagacaagacttaacttgaatcagcagctttttgagtcaattcttaaagatctt
aaggatgcagagtcggaaagggaagttgatgatgttgatgccaagtttaacttgcatttc
ccgccaggggaggttggtgtggatgaaggtcaatataagagacccaagaggagatcacaa
tatagtatttgcaataaggctggcttgtgggaggttgtgagcaagttcggatacagtgct
cagcaacttggatcactgctatctctggaaaggctgcctgatgagttggaagatgctaag
gagacgccagaagagatggcttcaaactttacatgtgcaatgtttgagactccacaagct
gtccttaaaggagccaggcatatggctgcggtcgagataagttgtgagccatctgtcaag
aaatatgttcgtggtatctatatggagaatgctgtagtttcaaccagtcctacttctgat
ggaaaaatagccatagattctttccatcaatttgcaggtgtgaagtggttgcgtgaaaaa
ccattgagcagatttgaggatgcacagtggctccttatccagaaggctgaagaggagaag
cttcttcaagtaactgttaagcttccagaaaagtgtctgaatcagttgattaaagaatgt
aatgaactatatctcagtaatggcgttagtaaatctgctcaacaatggaatgaccagaga
aagcttatattcagtgatgctctttatggttttcttttgccatcaatggagaaagaagca
agatccttgttggctagtagagctaagaactggttacttttcgaatatggcaagggttta
tggaataaagtttctgtggggccttaccaaaggaaggaaaatgatattaattctgatgag
gaagctgcaccacgagtcatggcttgctgttggggccctgggaatcctgcaaccactttt
gtgatgctagattcatccggggaggtgcttgatgtgctttacactagttctcttacatta
cggtctcaaaatgttaatgaccagcaacgcaagaaaaatgatcagcaacgtgttttgaag
ttcatgactgatcatcaaccacatgttgttgttcttggagctgtgaatttgtcttgtacc
cggttgaaagatgatatttatgagattatttttaagatggtggaggaaaatcctagagat
gttgggcatgaaatggatgagctgagcattgtatatggggatgaatctctaccccgtctt
tatgaaaattctaggatttcatcagatcagctacctggccagtcaggtattgttaagcgg
gctgttgctcttggccgttatcttcaaaatccattggcaatggttgctactttgtgtgga
ccaggtaaggagatattgtcttggaagcttaatcctttggagaactttctaacgacagat
gagaagtatggcatgattgaacaggttttggttgatgtcacaaaccaggtcggccttgat
gttaatttggctgcaagccatgaatggttgtttgctcctttgcaattcatttctggcctt
gggcctagaaaggcagcatcactgcagagatcattggtaagagttggaacaattttcagt
cggaaggactttntgacaacccatggatttggtaagaaggtgtttgtcaatgtgatagct
tttctgcgtgtccgtcggagtggtcttgctgccaacagcagccagttcattgatttgttg
gatgatactagaatacatccagaatcttatcttgttgcccaggagttggccaaagatgtc
tatgatgaggattttaaaggtgacaatgatgatgaggatgcattggagatggcaatagaa
catgttagggaccggcctagtttgttgaaaagccttcgtcttgataattatctaaaaagc
aaggggcgccaaaataagagggagaccttttatgatataagaagggaattaattcagggc
tttcaggattggcgtaaacaatataaagaaccaagtcaagatgaggagttcttcatgatt
tcaggggaaactgaggataccctgtcagaaggcctaattgtgcaagctacagttcgcaga
gtgcaaggtggacgagctgtctgtgtacttgaatctggattgactgggatgattatgaaa
gaagactatgcagatgattggagagatattattgagttgtctgataggctgcatgaaggt
gacatcctgacctgcaagattaaatcaattcaaaagaataggtatcaggtgtttctggtt
tgtaaagatagtgagatgagaagcaaccgataccaccttgtccagaaccttgatccttac
taccatgaggagcgaagcagtatacagagtgagcaagagaaagcacgtaaagagaaggag
ctggctaagaagcattttaagccaaggatgattgtccatccacgcttccaaaatattact
gcggatgaagctattgagtatttatctgacaaggatcctggagaaagcattatccgtccc
agttcacgcnggccttcttatttaactttaactctcaaagtatatgatggagtttatgct
aacaaagatattgttgaaggtggaaaagaacacaaggacatcaccagcctgctccgcatt
gggaagacattgaaaattgggnaagacacttttgaggatttggatgatgtaatggaccga
tatgttgatccccttgtgtctcatctaaaggcgatgttgagttatcgtaagttcaggagg
ggaactaaaacagaggttgatgagcttctaaggattgagaaatcagagtaccctatgagg
attgtgtattgttttggaatttctcatgaacatccaggcactttcattcttacttatata
aggagtacaaatccgcatcatgagtatgttggcttatatcccaagggattcaagttcaga
aaaaggatgtttgaagacattgatcgtctggttgcatatttccagaggcatattgacgag
ccacagcatgagtcagctccatcaattagatcagttgcagcaatggtaccaatgcggagc
cctgctgctggaggctctgcaggggcatctnatggtagtagttggggtggttcaacgaat
gaaggtggttggagaggccactcttttgacaggggtcaatcttccactccagggtcaaga
acaggccgaaatgattacagaaatagcagtaacagagatgggcatccaagtggtgtacca
cggccatatggtgggcgtggacgtggtaggggctcatataacagcagcagaggacagaac
gaggggcaggattcatcttatgatgagacttccaagtgggattcaggtaccaagaaaggg
ggtgatgggtggggtaattttccaggtgcaaaagttcaaaactctccaggtagggaagct
ttccctggtgggtggggcagtggtggaactgaaagtggcagtggttggtaa
DBGET
integrated database retrieval system
