Durio zibethinus (durian): 111311605
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Entry
111311605 CDS
T05242
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111311605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111311605
03041 Spliceosome [BR:
dzi03041
]
111311605
03036 Chromosome and associated proteins [BR:
dzi03036
]
111311605
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111311605
Spliceosome [BR:
dzi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111311605
Complex B
111311605
Complex C
U2 SnRNP specific factors
111311605
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
111311605
TFTC complex
111311605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
111311605
NCBI-ProteinID:
XP_022766859
UniProt:
A0A6P6APP5
LinkDB
All DBs
Position
Unknown
AA seq
1387 aa
AA seq
DB search
MALSEEECSTAKASSSSSSSSSATASSQGVNYLAKCVLRGSVVLQVAYGHLRSPSSFDVV
FGKETSIELVIIGEDGIATSVCEQPVFGTIKDLAILPWNEKVSARNSQMRGKDLLIVISD
SGKLSFLTFCNEMHRFFPVALVQLSDPGNSRYQLGRMLAVDSAGCFIATSAYEDRLALFS
LSMSDGDDIIDKRIFYPPENDGSGSSTRTTQRTIIRGTIWSMCFVSKGSVQPNKDHNPVL
AIVLNRKGNVLNELVLLGWNIKEHAVYVLSQYLEAGPLAHSIVEVPHSCGYAFLLRVGDA
LLMDLRDAHNPNCVYRTTLDFSAHALEEQNCLEELCVAHDVDDDGLFNVAACALLQLSDY
DPMCIDDDNGDGKSTCKHVCSFSWEPXSDRCPRMIFCLDTGEFFMIEISFDSDGPKVNVS
DCLYRSQPCKSLLWVDGGFLAAIVEMGDGLVLKVESERLIYTSPIQNIVPIFDMSIVDYH
GEKCDQMFACCGVAPEGSLRIIRSGISIEKLLRTAPIYQGISGTWTVRMKVTDPYHSFLV
LSFVEETRVLSVGLSFTDVTDSVGFQPDVCTLACGLVGDGQLVQIHQNAIRLCLPTKAAH
SEGIPLSSPVCTTWSPDNTSISLGAVGQNLIVVSTSNPYFLFILGVRSLSAYYYEIYELQ
YVRLQYELSCISIPQKHLSSPLNPVNDFGRAVVPVGVGRDITFVIGTHRPSVEILSFTTQ
GLKILATGTISLTSTMETAISGCIPQDVRLILVDQFYVLSGLRNGMLLRYEWPSAFVTSS
SELHGCSFSSPFLGKVERVLSNTKTANLFGSETCAVNMSEKDDVPITLQLIATRRIGITP
VFLVPLSDSLDADIIALSDRPWLLHTARHSLSYTSISFEPSTHATPVCSVECPKGVLFVA
ENSLHLVEMVHSKRLNVQKFHLGGTPRKVLYHSESKLLVVMRTELSNDTCSSDICCVDPL
SGSVMASFKLELGETGKCMELIRAGNEQVLVIGTSLSPGPAIMPSGEAESTKGRLIVLCI
EHVQNSDSGSMTLSSMAGSSSQRNSPFCEIVGHATEQLSSSSICSSPDDTSCDGIKLEET
EVWQLRLAYTTTWPGMVLAICPYLDRYFLASAGNAFYVCAFPSDNPQRVRRFAIARTRFM
ITSLTAHFTRIAVGDCRDGILFYSYNEDTKKLDQMYCDPSQRLVADCVLTDVDTAVVSDR
KGSIAVLSCSDRLEDNASPERNLTLTCAYYMGEIAMSIRKGSFIYKLPADDMLNICELNA
SVDPTHNSIMASTLLGSIMIFIPISREEHELLEAVQARLVVHPLTAPVLGNDHNEYRSRE
NPVGVPKILDGDMLAQFLELTSMQQEDVLSFPIASSDTHKLSLKPPSSPIPINKVVQLLE
RVHYALN
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctcggaggaagagtgctcaaccgcaaaggcatcttcctcttcatcatcgtcg
tcatcggcgactgcttcttcccaaggcgttaactaccttgcaaagtgcgttctcagagga
agcgttgtcctccaggtcgcttacggtcacctccgctctccttcttccttcgacgtcgtt
ttcggcaaggagacgtccatagagttggtaataattggtgaagatggtattgcaacatct
gtctgtgagcagcctgtctttggtacaataaaggatcttgccattctcccctggaatgag
aaggtctctgcacgaaattctcagatgcgtgggaaagacctgctgattgttatttctgat
tctggaaagctatcatttctcacattttgtaatgagatgcacaggtttttccccgtggcc
cttgttcagctttctgatcctggaaactcaaggtatcaacttggaagaatgctagctgtt
gattccgcaggttgtttcattgctactagtgcttatgaagaccgattggctcttttttct
ctttcaatgtctgatggagatgatattattgataagagaatattttatcctcctgagaat
gacggcagtggtagttctaccagaactacccaaagaactattatacgcggtacaatatgg
agcatgtgctttgtttcaaaaggttctgtccaaccaaataaggatcacaatcccgttcta
gccattgttctaaataggaaaggaaatgtcctgaatgaactggttttgctgggatggaat
attaaagaacatgcagtttacgtcctttcacagtatcttgaagctggaccactagcacat
agcattgttgaagttcctcattcctgtggctatgcattcctgttgagggttggtgatgca
ctcttgatggatcttagggatgcacacaatcccaattgtgtgtatagaacaaccttagac
ttttcagcccatgcactagaggaacagaattgtcttgaagagttatgtgtagcacatgat
gttgatgatgatggtttatttaatgttgctgcatgtgctttattgcagctaagtgattat
gatccaatgtgtatagatgatgacaatggcgatggaaaatcaacttgcaaacatgtatgc
tcatttagttgggaaccanaaagtgatagatgtccgaggatgattttttgtcttgatact
ggagaatttttcatgattgagatttcatttgattctgatggtcctaaagtgaatgtatct
gattgcctctacagaagtcaaccttgcaagtcccttttgtgggttgatggtgggttcctg
gcagcaattgtagaaatgggggatggtctggtccttaaggtagaaagtgagaggctaata
tacacaagtcctattcaaaatatagtgccaatctttgacatgtcaatagtggattaccat
ggggagaaatgtgatcaaatgtttgcatgctgtggtgttgcaccagagggatcattaaga
attatacgaagtggtataagcatagaaaagcttttgaggactgcccccatttaccaaggc
ataagtggaacttggacagttcggatgaaagtaacagatccttatcattcttttcttgtg
ctatcatttgttgaagagaccagagtactgtcagttggattaagctttactgatgttact
gattcagttggtttccaacctgatgtctgtactttggcatgtggtcttgtgggtgatggc
cagcttgtccaaattcaccaaaatgcaattaggctttgtttgcctacaaaggctgcccat
tctgaaggtattcctttgtcttctccagtttgcacaacttggtccccagataacacaagt
atcagtttgggggcagttgggcaaaatttgatagttgtctccacttctaatccatatttt
ctatttattcttggggtgagatcactatcagcatattattatgaaatatatgaattgcag
tatgtgagattgcagtatgagttatcgtgcatatcaatacctcaaaagcatttaagctct
cctttaaacccggtgaatgattttggcagagccgttgttcctgttggagttggcagggat
attacctttgttattggtacacataggccatcagtggaaattctgtcatttacaactcaa
ggcctaaaaattcttgctactggaacaatttcattaacaagtactatggaaactgcaatc
agtggttgcattcctcaagacgttaggctaatattagttgatcagttttatgttctgtca
ggattaaggaatggaatgctgcttcggtatgagtggccttctgcctttgtgacttcttca
tcagaattacatggttgtagtttttctagtccttttcttggaaaagttgagagagttttg
tcaaatacaaagaccgcaaatctgtttggttcagaaacgtgtgctgttaatatgagtgag
aaagatgatgttcctattactcttcagttgatcgcgactcgtagaattggcatcacccca
gttttcctggttcccctgagtgattcacttgatgctgatattatagctctcagtgacaga
ccttggttattgcacacggctaggcacagcctttcttatacttctatatcatttgaacct
tccacgcatgcaacccctgtatgttctgttgaatgccctaaaggagttttatttgttgca
gaaaacagtttacatttggtggagatggtgcacagtaagaggcttaatgtgcagaagttt
catcttggaggcactccgcggaaggtcctttatcatagtgaaagtaagcttttggttgtg
atgaggactgagctaagtaacgacacatgttcttctgatatttgttgtgtagaccccctc
agtgggtctgtgatggcatctttcaaactcgaacttggagaaactggaaaatgcatggag
ctaattagggctggaaatgaacaggttctggttattggaactagcctgtctcctggtcca
gcaataatgcccagtggtgaagcagaaagcaccaagggccgtcttattgttctctgcatt
gaacatgtgcaaaattcagatagcggttcaatgacactctcttctatggctgggtcatct
tctcaacgaaactcaccattttgtgaaattgttggccatgccactgaacaactatcaagc
agtagtatctgcagtagcccagatgatactagctgtgatggaataaaactggaagaaact
gaagtatggcagttacggttagcttacacaaccacctggcctggaatggtacttgctata
tgtccatatctagaccgttacttcttggcatctgctggtaatgctttttacgtatgtgct
tttccaagtgataatcctcaaagggtgagaagatttgcaatagcgaggacacggtttatg
ataacatcattgactgcacattttactagaattgctgtaggtgattgtcgtgatggcatt
cttttctattcatataatgaggacaccaaaaaactggatcaaatgtattgtgacccatca
cagaggttagttgctgattgtgttcttacagatgttgatactgctgttgtttcggatcgt
aagggcagcattgctgtcttgtcgtgttcagatcgtctggaagataatgcaagtccagaa
cgtaacttaacactgacttgtgcatactatatgggtgagattgccatgagcatcagaaag
ggttcatttatttacaaacttccagctgatgatatgttgaacatctgtgaacttaatgca
agtgttgaccctacacacaattctataatggccagcacgctcctaggaagcataatgatc
ttcattccaatatcaagggaggaacatgaactgctggaagctgtccaagctagactcgtt
gtccatccattgactgctcctgtactgggcaatgatcataatgagtaccgtagccgtgaa
aacccagttggagtcccgaagatacttgatggtgacatgctcgctcaattcctggagctt
acaagcatgcaacaagaggatgtattatcatttcccatcgcatcttcagatacacataag
ttgagtttaaaaccaccatcttcacccatccccatcaacaaggtcgtgcaactccttgag
cgggtccattatgccttgaattaa
DBGET
integrated database retrieval system
